DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17019 and AT4G24204

DIOPT Version :10

Sequence 1:NP_610827.2 Gene:CG17019 / 36425 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001119040.1 Gene:AT4G24204 / 6240443 AraportID:AT4G24204 Length:178 Species:Arabidopsis thaliana


Alignment Length:50 Identity:23/50 - (46%)
Similarity:29/50 - (57%) Gaps:9/50 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   652 LCKICMDAPIECVFLECGHMATCTSCG-KVLNE----CPICRQYIVRVVR 696
            ||.||.:....|.|:.|||.|||..|. ::|:|    |||||    ||:|
plant   123 LCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPICR----RVIR 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17019NP_610827.2 FYVE_CARP 1..42 CDD:277289
RING-HC_CARP 651..698 CDD:438163 22/49 (45%)
AT4G24204NP_001119040.1 zf-C3HC4_3 122..170 CDD:464042 22/49 (45%)
Blue background indicates that the domain is not in the aligned region.

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