DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG17019 and AT4G24204

Sequence 1:NP_001286365.1 Gene:CG17019 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001119040.1 Gene:AT4G24204 AraportID:AT4G24204 Length:178 Species:Arabidopsis thaliana

Alignment Length:50 Identity:23/50 (46%)
Similarity:29/50 (58%) Gaps:9/50 (18%)


  Fly   652 LCKICMDAPIECVFLECGHMATCTSCG-KVLNE----CPICRQYIVRVVR 696
            ||.||.:....|.|:.|||.|||..|. ::|:|    |||||    ||:|
plant   123 LCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPICR----RVIR 168

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG17019NP_001286365.1 FYVE_CARP 1..42 CDD:277289
zf-C3HC4_3 650..694 CDD:290631 21/47 (45%)
AT4G24204NP_001119040.1 zf-C3HC4_3 121..170 CDD:290631 23/50 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 1 1.000 T125041
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
11.000

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