DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and gli2a

DIOPT Version :10

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_571042.1 Gene:gli2a / 30154 ZFINID:ZDB-GENE-990706-8 Length:1439 Species:Danio rerio


Alignment Length:336 Identity:119/336 - (35%)
Similarity:156/336 - (46%) Gaps:71/336 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 HQQHQQQMQHIRF-PTPPITPPRP---------IAGYGYRQRTQS-------------------- 90
            ||...||.....| .|||:..|.|         :|.......|.|                    
Zfish   282 HQLLSQQRGLNAFGHTPPLLQPSPALSSRQQTLVAAAALNNTTSSSTSSSTADTSTESSQNAGGD 346

  Fly    91 ---------VIMK--------------ARGQQDELCRSPVEFPD--DSKSCSSSSECGTASDFVC 130
                     :|.|              :.|.||.|     |..:  |...|....|....::  |
Zfish   347 PAVSSTVNPMIFKRSKVKTEAEGPHPISPGSQDHL-----ELREELDKDECKQEPEAVYETN--C 404

  Fly   131 NWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHTRTHTKEKP 195
            :|..|.:.:||.|.|..|::..|......:  :.|||..|.|.::.|.|:|.::||.|.||.|||
Zfish   405 HWEGCAKEYDTQDQLVHHISNDHIHGEKKE--FVCRWVECSREQKPFKAQYMLVVHMRRHTGEKP 467

  Fly   196 HRCHL--CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKH-TRTHSMEKPYMCK 257
            |:|..  |.|::||.||||.|:|||:|||||.|..|||.||:||:|||.|| .||||.||||:||
Zfish   468 HKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCK 532

  Fly   258 VAGCQKRYTDPSSLRKHVKTFKH--SIHLIASQPLTLPSVPCLLEASSES-AFTCLPAASSVEST 319
            :.||.|||||||||||||||. |  ..|:...|....|..|...:.:.|: |.|......:..|.
Zfish   533 IPGCTKRYTDPSSLRKHVKTV-HGPEAHVTKKQRGDAPPKPHPPKGNGENEAHTKHVRGRTDGSG 596

  Fly   320 SSSSSARYYDD 330
            .::|:.|..:|
Zfish   597 EANSTTRGVED 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
COG5048 192..>271 CDD:227381 54/81 (67%)
C2H2 Zn finger 198..218 CDD:275368 11/21 (52%)
C2H2 Zn finger 226..248 CDD:275368 14/22 (64%)
C2H2 Zn finger 256..277 CDD:275368 17/20 (85%)
gli2aNP_571042.1 C2H2 Zn finger 441..462 CDD:275368 8/20 (40%)
zf-H2C2_2 454..481 CDD:463886 12/26 (46%)
C2H2 Zn finger 470..492 CDD:275368 11/21 (52%)
zf-H2C2_2 484..511 CDD:463886 18/26 (69%)
SFP1 <494..554 CDD:227516 45/60 (75%)
C2H2 Zn finger 500..523 CDD:275368 14/22 (64%)
C2H2 Zn finger 531..552 CDD:275368 17/20 (85%)

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