DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and Glis1

DIOPT Version :10

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_006503035.1 Gene:Glis1 / 230587 MGIID:2386723 Length:804 Species:Mus musculus


Alignment Length:250 Identity:108/250 - (43%)
Similarity:136/250 - (54%) Gaps:37/250 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 CNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHTRTHTKEK 194
            |.|.||...::..:.|.:|:.:.| |.......:.|.|.||.|..:.||||||:|:|.|.|:.||
Mouse   383 CRWVDCCAAYEQQEELVRHIEKSH-IDQRKGEDFTCFWAGCVRRYKPFNARYKLLIHMRVHSGEK 446

  Fly   195 PHRCHL--CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTRTHSMEKPYMCK 257
            |::|..  |.|:|||.||||||:|||:|||||.|...|||||:||||||.||.|||...|||.|:
Mouse   447 PNKCMFEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQ 511

  Fly   258 VAGCQKRYTDPSSLRKHVKTFKHS---------IHLIASQPLTLPSVPCL----LEASSESAFTC 309
            :.||.||||||||||||||.  ||         :|..|.....:.| .||    |:||     |.
Mouse   512 IPGCSKRYTDPSSLRKHVKA--HSAKEQQVRKKLHTGADPEADVLS-ECLSLQQLQAS-----TL 568

  Fly   310 LPAASSVESTSSSSSARYYDDSNNEPSDY--SLKPKQ---DAEFSPSYWLGDRQH 359
            |||:....|.:.|....        |..|  |:.|:.   ....|||:.:..|.|
Mouse   569 LPASRGKGSQTLSQELL--------PGVYPGSVTPQNGLASGILSPSHDVPSRHH 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 11/19 (58%)
COG5048 192..>271 CDD:227381 53/80 (66%)
C2H2 Zn finger 198..218 CDD:275368 13/21 (62%)
C2H2 Zn finger 226..248 CDD:275368 15/21 (71%)
C2H2 Zn finger 256..277 CDD:275368 16/20 (80%)
Glis1XP_006503035.1 C2H2 Zn finger 387..406 CDD:275368 4/18 (22%)
C2H2 Zn finger 417..442 CDD:275368 14/24 (58%)
COG5048 446..>525 CDD:227381 52/78 (67%)
C2H2 Zn finger 450..472 CDD:275368 13/21 (62%)
C2H2 Zn finger 480..502 CDD:275368 15/21 (71%)
C2H2 Zn finger 510..532 CDD:275368 17/23 (74%)

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