Protein Alignment Nmda1 and Tmbim1

DIOPT Version :10

• Sequence 1: NP_523722.1
• Gene: Nmda1 / 36419
• FlyBaseID: FBgn0013305
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001007714.1
• Gene: Tmbim1 / 316516
• RGDID: 1359409
• Length: 309
• Species: Rattus norvegicus
• Alignment Length: 336
• Identity: 129/336 - (38%)
• Similarity: 187/336 - (55%)
• Gaps: 39/336 - (11%)

  Fly     1 MSWQSVPQYPQYQDPNQQYNYGGGNPPQGGYGGYPPQGGYPPQGPPQGYPPYAQGGAQPYPQP-Y 64
            ||..:.|  |.|:|.|..|   .|.||.||||        .|...|.|||.|     ..|||| |
  Rat     1 MSNPTAP--PPYEDHNPLY---PGRPPPGGYG--------QPSVLPGGYPAY-----PAYPQPGY 47

  Fly    65 GQGPPPGGYAPQPGFIQPP--PSAGGYGAYDDPESQPKNFSF-----DDQSIRRGFIRKVYLILM 122
            |.   |.|| |||   .||  |....||.....|.:..:.||     ||:.:|..||:|||.|:.
  Rat    48 GH---PAGY-PQP---IPPVHPMPMNYGHDYSEEERAGSDSFGPGEWDDRKVRHTFIQKVYCIIS 105

  Fly   123 GQLIVTFGAVALFVYHEGTKTFARNNMWLFWVALGVMLVTMLSMACCESVRRQTPTNFIFLGLFT 187
            .||::|...:|:|.:.|....:.|:|:.:::|:..|.:||.|.:.||:..||:.|.|.|.|.:||
  Rat   106 VQLLITVAIIAVFTFVEPVSEYVRSNVAVYYVSYAVFIVTYLILVCCQGPRRRFPWNIILLTIFT 170

  Fly   188 AAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMMGGILIACMVVFLIFG--- 249
            .|..|:.|..::.|..|.|::|:.|||.|.:::|||..|||.|||...|::....:|..:.|
  Rat   171 LALGFMTGAISSMYETKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLICVLGIVLAVTGAVT 235

  Fly   250 -IVAIFVKGKIITLVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLDIINIFM 313
             :|..|.....:.:|||.:||:.|:::|.|||||:: |..|::||||:||..||.:|.||:.||.
  Rat   236 SVVLFFEYIYWLHMVYAGLGAICFTLFLAYDTQLVL-GNRKHTISPEDYITGALQIYTDIVYIFT 299

  Fly   314 YILTIIGASRD 324
            ::|.::| :||
  Rat   300 FVLQLVG-NRD 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmda1	NP_523722.1	LFG_like	103..320	CDD:198410	87/225 (39%)
Tmbim1	NP_001007714.1	LFG_like	87..306	CDD:198410	85/219 (39%)