DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or49b and Or1a

DIOPT Version :10

Sequence 1:NP_523721.1 Gene:Or49b / 36413 FlyBaseID:FBgn0028963 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:400 Identity:83/400 - (20%)
Similarity:152/400 - (38%) Gaps:112/400 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VCIGLASFHIFTQIVYMMSTNEGLTGIIRNSYML--------VLWINTVLRAYLLLADHDRYLAL 86
            :|: ..||.:.|...:|:..        ||..:|        :..::::|:..:.||.....:.|
  Fly    44 MCL-TTSFELCTVCAFMVQN--------RNQIVLCSEALMHGLQMVSSLLKMAIFLAKSHDLVDL 99

  Fly    87 IQKLTEAYYDLLNLNDSYISEILDQVNKVGKLMARGNLFFGML--TSMGFGLYPLS--------- 140
            ||::...:.:    .|...:|...| |:.|:|||.  ::|.|.  ||:.|.|.|::         
  Fly   100 IQQIQSPFTE----EDLVGTEWRSQ-NQRGQLMAA--IYFMMCAGTSVSFLLMPVALTMLKYHST 157

  Fly   141 ------SSERVLPFGSKIPGLNEYESPYYEMWYIFQMLITPMGCCMYIPYTSL----------IV 189
                  ||.|||             .||    .:.|..:..|.||:.:...|.          :.
  Fly   158 GEFAPVSSFRVL-------------LPY----DVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLY 205

  Fly   190 GLIMFGIVRCKALQHRLRQVALKHPYGDRDPRELREEIIACIRYQQS-------------IIEYM 241
            |....|:    :||:|.....||             .|.:|....:|             :::.:
  Fly   206 GWCALGV----SLQYRRLGQQLK-------------RIPSCFNPSRSDFGLSGIFVEHARLLKIV 253

  Fly   242 DHINELTTMMFLFELMAFSALLCALLFMLIIVSGTSQLIIVCMYINMILAQILALYWY-ANELRE 305
            .|.|.....:...|::....|.|:::.. .|:..|:|......:.::::...|.:|.: |.::|.
  Fly   254 QHFNYSFMEIAFVEVVIICGLYCSVICQ-YIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRL 317

  Fly   306 QNLAVATAAYET-EWFTFDVPLRKNILFMMMRAQRPAAI-----LLGNIRPITLELFQNLLNTTY 364
            :....:...||. .|.......||..||.:.||||...:     .||  ||:.:.:|:    |..
  Fly   318 EAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELG--RPLLVWIFR----TAG 376

  Fly   365 TFFTVLKRVY 374
            :|.|::..:|
  Fly   377 SFTTLMNALY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or49bNP_523721.1 7tm_6 53..364 CDD:251636 75/365 (21%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 72/344 (21%)

Return to query results.
Submit another query.