DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GLS and gls2

DIOPT Version :10

Sequence 1:NP_001163129.1 Gene:GLS / 36396 FlyBaseID:FBgn0261625 Length:775 Species:Drosophila melanogaster
Sequence 2:XP_002934555.2 Gene:gls2 / 100492220 XenbaseID:XB-GENE-985276 Length:592 Species:Xenopus tropicalis


Alignment Length:557 Identity:276/557 - (49%)
Similarity:365/557 - (65%) Gaps:28/557 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 EDNAKLHREQEQRNAEDV-----------LFDMFASEETGLISMGKFLAGLKTTGIRRNDPRVRE 149
            :.|..:..|....|.|.:           |.....||....:.:.||:..||..||..:|||:::
 Frog    36 DHNIGMPGEAAPHNTEQITCNSVLQRLSNLLFYTVSEGQEQLPVYKFVNSLKANGILTSDPRLKD 100

  Fly   150 LMDNLKKVHKLNNYETGSSAETQHLNRETFKAVVAPNIVLIAKAFRQQFVIPDFTSFVKDIEDIY 214
            .||.|::.  :....||:.     ::||.|:..|..|||.:.:...::..||||..|...:..:|
 Frog   101 CMDMLQQT--VQELATGAV-----MDREMFQKCVQSNIVFLTQIVCKKLAIPDFEQFTLHVNRLY 158

  Fly   215 NRCKTNTLGKLADYIPQLARYNPDSWGLSICTIDGQRFSIGDVDVPFTLQSCSKPLTYAIALEKL 279
            ........|::|:||||||:.:|:.||:|:||:||||.||||..|||.||||.|||.|:||:..|
 Frog   159 ENASALDKGEVANYIPQLAKSSPERWGVSLCTVDGQRHSIGDTGVPFCLQSCVKPLKYSIAVNDL 223

  Fly   280 GPKVVHSYVGQEPSGRNFNELVLDQNKKPHNPMINAGAILTCSLMNALVKPDMTSAEIFDYTMSW 344
            |...||.::|:||||..||:|.|:...||||||:|||||:.||    |:||....||.|||.|..
 Frog   224 GTDFVHQHMGKEPSGNRFNKLSLNHEGKPHNPMVNAGAIVVCS----LIKPSTNKAEKFDYIMQS 284

  Fly   345 FKRLSGGEYIGFNNAVFLSEREAADRNYALGFYMRENKCFPKRTNLKEVMDFYFQCCSMETNCEA 409
            .|.::|.|::||:||.|.||:|..|||||:|:||:|.||||...::...:|.|||.||:|..||:
 Frog   285 LKNMAGNEFVGFSNATFQSEKETGDRNYAIGYYMKEKKCFPSGIDMISALDLYFQLCSIEVTCES 349

  Fly   410 MSVIAASLANGGICPTTEEKVFRPEVIRDVLSIMHSCGTYDYSGQFAFKVGLPAKSGVSGGMMLV 474
            .|||||:||||||||.|.::|...|.:|:.||:|||||.||:||||||.|||||||||||.::||
 Frog   350 GSVIAATLANGGICPITGQRVLSAEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVSGAILLV 414

  Fly   475 IPNVMGIFAWSPPLDHLGNTVRGLQFCEELVSMFNFHRYDNLKHLSNKKDPRKHRYETKGLSIVN 539
            :|||||:|.||||||.:||:|||:.||:||||:||||.||||:|...|.||||.|.|.:..::||
 Frog   415 VPNVMGVFCWSPPLDRIGNSVRGIHFCQELVSLFNFHNYDNLRHCVRKLDPRKERSEAQQKTVVN 479

  Fly   540 LLFSAASGDVTALRRHRLSGMDITLADYDGRTALHLAASEGHLECVKFLLEQCHVPHNPKDRWGN 604
            |||:|.||||:||||..||.||:...|||.|||||:||:||||:.||||:|.|.|....:|||||
 Frog   480 LLFAAYSGDVSALRRFALSAMDMEQKDYDSRTALHVAAAEGHLDVVKFLIEGCRVNPFAEDRWGN 544

  Fly   605 LPVDEAENFGHCHVVEFLRSWAE------KADQSSEE 635
            .|:.:|..|....||..|..:.|      :..:||||
 Frog   545 TPLQDAIRFERHDVVTLLSEYQEAYQKYLRGPESSEE 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLSNP_001163129.1 EF-hand_14 110..201 CDD:465587 25/101 (25%)
Glutaminase 223..511 CDD:461499 173/287 (60%)
Ank_2 540..622 CDD:463710 47/81 (58%)
ANK repeat 540..566 CDD:293786 16/25 (64%)
ANK repeat 568..600 CDD:293786 19/31 (61%)
gls2XP_002934555.2 EF-hand_14 62..145 CDD:465587 24/89 (27%)
Glutaminase 167..451 CDD:461499 173/287 (60%)
Ank_2 480..565 CDD:463710 48/84 (57%)
ANK repeat 480..506 CDD:293786 16/25 (64%)
ANK repeat 508..540 CDD:293786 19/31 (61%)

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