DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GLS and gls

DIOPT Version :10

Sequence 1:NP_001163129.1 Gene:GLS / 36396 FlyBaseID:FBgn0261625 Length:775 Species:Drosophila melanogaster
Sequence 2:XP_031748805.1 Gene:gls / 100379734 XenbaseID:XB-GENE-975800 Length:656 Species:Xenopus tropicalis


Alignment Length:585 Identity:299/585 - (51%)
Similarity:403/585 - (68%) Gaps:31/585 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KLSFYDTSSTPKTKEDNAKLHREQEQRNAEDVLFDMFASEETGLISMGKFLAGLKTTGIRRNDPR 146
            ||:..|..|..|...|..| :::....:.||:||...| |....|.:.||:..||.||:|.:|||
 Frog    82 KLTPPDVESASKPSSDEKK-NKQGLLPSLEDLLFYTIA-EGQEKIPVHKFITALKATGLRTSDPR 144

  Fly   147 VRELMDNLKKVHKLNNYETGSSAETQH----LNRETFKAVVAPNIVLIAKAFRQQFVIPDFTSFV 207
            ::|.||.|:           .|.:|..    |::|.||..|..||||:.:|||::||||||.||.
 Frog   145 LKECMDMLR-----------LSLQTMSDGVMLDKELFKKCVQSNIVLLTQAFRRKFVIPDFMSFT 198

  Fly   208 KDIEDIYNRCKTNTLGKLADYIPQLARYNPDSWGLSICTIDGQRFSIGDVDVPFTLQSCSKPLTY 272
            ..|:::|...:..:.||:||||||||:::||.||:||||:||||.|:||..|||.||||.|||.|
 Frog   199 SHIDELYENARKLSGGKVADYIPQLAKFSPDLWGVSICTVDGQRHSVGDTKVPFCLQSCVKPLKY 263

  Fly   273 AIALEKLGPKVVHSYVGQEPSGRNFNELVLDQNKKPHNPMINAGAIL---------TCSLMNALV 328
            |||:..|..:.||.|||:||||..||:|.|::::||||||:|||||:         |.:|||..:
 Frog   264 AIAVNDLSTEYVHRYVGKEPSGLRFNKLFLNEDEKPHNPMVNAGAIVITSLIKAFGTFALMNKTI 328

  Fly   329 -----KPDMTSAEIFDYTMSWFKRLSGGEYIGFNNAVFLSEREAADRNYALGFYMRENKCFPKRT 388
                 |...::||.|||.|.:|.:::|.||:||:||.|.||||:.|||:|:|:|::|.||||:.|
 Frog   329 ERGHRKQGSSNAEKFDYVMQFFNKMAGNEYVGFSNATFQSERESGDRNFAIGYYLKEKKCFPEHT 393

  Fly   389 NLKEVMDFYFQCCSMETNCEAMSVIAASLANGGICPTTEEKVFRPEVIRDVLSIMHSCGTYDYSG 453
            ::...:|||||.||:|..||:.||:||:|||||.||.|.|::..||.:|:.||:|||||.||:||
 Frog   394 DMVGTLDFYFQLCSIEVTCESASVMAATLANGGFCPITGERILSPEAVRNTLSLMHSCGMYDFSG 458

  Fly   454 QFAFKVGLPAKSGVSGGMMLVIPNVMGIFAWSPPLDHLGNTVRGLQFCEELVSMFNFHRYDNLKH 518
            ||||.||||:|||||||::||:|||||:..||||||.|||:|||:|||::|||:.|||.||||:|
 Frog   459 QFAFHVGLPSKSGVSGGILLVVPNVMGMMCWSPPLDKLGNSVRGIQFCQDLVSLCNFHNYDNLRH 523

  Fly   519 LSNKKDPRKHRYETKGLSIVNLLFSAASGDVTALRRHRLSGMDITLADYDGRTALHLAASEGHLE 583
            .:.|.|||:...:.:..|::||||:|.:|||:||||..|||||:...|||.|||||:|::|||:|
 Frog   524 FAKKLDPRREGGDQRVKSVINLLFAAYTGDVSALRRFALSGMDMEQRDYDSRTALHVASAEGHVE 588

  Fly   584 CVKFLLEQCHVPHNPKDRWGNLPVDEAENFGHCHVVEFLRSWAEKADQSSEECKPEAVTSKTQAD 648
            .|:||||.|.|...|||||.|.|:|||.:|||..||:.|:.:........|.......|.:|..|
 Frog   589 VVRFLLEACKVNPFPKDRWNNTPMDEAMHFGHHDVVKILQEYQNNYKPLDEPNNGNDQTVQTNLD 653

  Fly   649  648
             Frog   654  653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLSNP_001163129.1 EF-hand_14 110..201 CDD:465587 37/94 (39%)
Glutaminase 223..511 CDD:461499 178/301 (59%)
Ank_2 540..622 CDD:463710 51/81 (63%)
ANK repeat 540..566 CDD:293786 16/25 (64%)
ANK repeat 568..600 CDD:293786 19/31 (61%)
glsXP_031748805.1 EF-hand_14 109..192 CDD:465587 37/94 (39%)
Glutaminase 214..516 CDD:461499 178/301 (59%)
ANKYR <545..>630 CDD:440430 52/84 (62%)
ANK repeat 545..571 CDD:293786 16/25 (64%)
ANK repeat 573..605 CDD:293786 19/31 (61%)

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