DRSC/TRiP Functional Genomics Resources

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Protein Alignment spt4 and SUPT4H1

DIOPT Version :10

Sequence 1:NP_610802.1 Gene:spt4 / 36387 FlyBaseID:FBgn0028683 Length:116 Species:Drosophila melanogaster
Sequence 2:NP_003159.1 Gene:SUPT4H1 / 6827 HGNCID:11467 Length:117 Species:Homo sapiens


Alignment Length:112 Identity:70/112 - (62%)
Similarity:94/112 - (83%) Gaps:0/112 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFDAIPKDLRGLRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTT 65
            ||.:.:|||||.|||||:|||||:.||||.|||:||:.:|:||.|::.|||.||::||||||:.:
Human     1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMS 65

  Fly    66 PTDSWVAKWQRLSRFTRGIYAISVSGTLPQSTLRDMKNRGIVYKSRD 112
            |.||||:||||:|.|..|:||:||:|.|||..:|::|:||:.|||||
Human    66 PEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRD 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spt4NP_610802.1 Spt4 11..108 CDD:153422 59/96 (61%)
SUPT4H1NP_003159.1 Interaction with SUPT5H 2..40 25/37 (68%)
Spt4 11..108 CDD:153422 59/96 (61%)

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