DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sin3A and Sin3A

DIOPT Version :10

Sequence 1:NP_001246282.1 Gene:Sin3A / 36382 FlyBaseID:FBgn0022764 Length:2066 Species:Drosophila melanogaster
Sequence 2:XP_061516350.1 Gene:Sin3A / 1278063 VectorBaseID:AGAMI1_003538 Length:2220 Species:Anopheles gambiae


Alignment Length:2429 Identity:951/2429 - (39%)
Similarity:1201/2429 - (49%) Gaps:674/2429 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MKRTRVDEVQFGTRPVPQTSGGVGVGVVGVTGGGPTSGGGGTATVGVNTTGVTIGTVVPSAHNAT 66
            |||.|.:|:|||...|...:|...:    :|...|.:        ..::||.||...:|      
Mosquito     1 MKRGRTEEIQFGQPRVQPPTGQQRI----ITTTQPHN--------VASSTGTTIQYQIP------ 47

  Fly    67 ISGIGSIHHRILTPQHGGAQTIAYLPSTTPTATNLKTTTSIVDSTTAGGPVGAGAQVAVGVGSAA 131
                                     |:...|||...:..|:.:.:|.......|.|         
Mosquito    48 -------------------------PNVIKTATPPDSVNSVTNLSTQQQQQQQGTQ--------- 78

  Fly   132 GGGGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANTADGANTVQIHVTGGGAANNPASAQ--T 194
                :|....:|   ::||||:|             ||..|:|.|:...|     .||...|  .
Mosquito    79 ----LVAPQQAT---SVQYTTTY-------------NTTLGSNLVKTQQT-----TNPQQQQIHV 118

  Fly   195 VSSSSQTGTIRQRTISGTQTVATAVG-NLATISQQQPVQQS----PLGKAQTPPSSVVANSIPVG 254
            |::|:|   :|..|...|...||||. |..|.:....|..|    ..|..|...:|:....:|.|
Mosquito   119 VNASNQ---VRGPTHKSTVVNATAVATNAGTANSNSSVVSSGGVTAGGGQQVITTSMSPGVLPGG 180

  Fly   255 G--------TTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311
            |        ..|||||:  ...|||||||||||||||:::.:|||:||:||||||||||..||||
Mosquito   181 GGGAAQGPPPPPPQGQA--QLQRLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTP 243

  Fly   312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPTSTGTV-----H 371
            |||:|||.||:||.|||.|||.|||||||||:.::..||.:..||:..||.|.:.....     |
Mosquito   244 GVIQRVSNLFRGHPELIVGFNTFLPPGYKIEVQANDQGCYLFQVSVSVPPTASSGASVAPQPSPH 308

  Fly   372 MLTGNSSMSGAGHIAIKTTNAATLTPAAGAG--AAAAAAAVAQIQ-SAGAVNLMTHGG------A 427
            ..  |:...|.|.|       ||..|.:|||  ....|::|.... :.||||||.:||      |
Mosquito   309 KY--NTIFQGGGQI-------ATGGPGSGAGGTTVVTASSVGNASGTTGAVNLMAYGGGHAATAA 364

  Fly   428 SLTQTTIHALQQATPPQSQSPGGGHVHVSVTNSTAANA-------VVPGQPGISVSAHNVPQNYS 485
            ......||.   .||  .|.|.||....:.:.:||.||       ...|    ..|...|.||:|
Mosquito   365 PGASVPIHG---GTP--LQQPTGGTAGGNASPATAQNAQTLTATTTTTG----GASGPQVAQNFS 420

  Fly   486 ----RDRERATIT---------PTGQVAGAAANVNASASI------------VVGGPPTPNS--- 522
                ..|||...|         |||..|..|::....:::            ||.|..||::   
Mosquito   421 SRSDHHRERTISTGSVASNASLPTGVTASTASSTTVVSAVDATTGGGSAGATVVTGQATPSNIHR 485

  Fly   523 ------LSELSPHGGAGGGPGAGAAQHNL--------HHIQQAHQ---------------SILLG 558
                  :|:.....|.|.. |||.....:        ||.|...|               :::..
Mosquito   486 ILTQQIISQQQQQQGTGAA-GAGMVPAGMVTAPTQVQHHQQTTMQQVQPPPEAQTATVTTTVVPT 549

  Fly   559 ETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGS----LNQGKMLT 619
            .|...||||||||||||||||||||..||.|||:||||||.||:|||..|||:    :...|.||
Mosquito   550 PTATANQPVEFNHAITYVNKIKNRFHTQPEKYKRFLEILHTYQKEQKTYKEGAQSGCMTSAKQLT 614

  Fly   620 EQEVYTQVAKLFGQDEDLLREFGQFLPDATNHQSGQYMSK---------------SASVHNDHGK 669
            |.|||||||:||...|||||||||||||||:|.:...|.:               :||:| ||..
Mosquito   615 EAEVYTQVAQLFDNQEDLLREFGQFLPDATSHHNQAAMQQHHLASGKNNSHNLVVNASMH-DHQH 678

  Fly   670 R--------------------------PTAT-----LSGGAHITMSSASPAPSGSPLHLGATTLP 703
            :                          |..|     |..||           ||..:|.|.....
Mosquito   679 QQQQQQQQQQQQQQQQQQQPQQQQLGVPAGTAGIVGLGSGA-----------SGPAVHGGGGGGK 732

  Fly   704 QIDKSAHAAAIGNLSAVNTS---VSIKTYNNNQQQQNHVIGSGLNATRNDILFEKDYHAGLQQQA 765
            ::..|       ||:.|.:.   .::|.||:.|.           |....:..|:|:........
Mosquito   733 KLGNS-------NLAGVGSGAGMANLKVYNSMQP-----------ANMGRLQQERDFSTMGTDGI 779

  Fly   766 HQRGAGVGGHHHLAGT---------AAGANIGRPGVG-ASVMVSYDKEHRNNHHVQKYVGHAP-- 818
            ...|:||||......|         .||.||    || |:||:..|:.|...      ||..|  
Mosquito   780 SIHGSGVGGGMPPGSTISVSSGAIRTAGGNI----VGTAAVMLEKDRNHMGG------VGSGPGS 834

  Fly   819 -----------NQNLTHG-----HNAKKS--------PSYG---IPSVIGSMPHIS--------- 847
                       |....||     .||..:        |..|   :|||:.::...:         
Mosquito   835 GGVGGVGGGGMNAKYIHGASIATMNATGAMVGGSVLPPGAGPNVVPSVMANLVSANVGGGGSGGG 899

  Fly   848 DNSLDRSSPGISYATPPL----PSGPHGQHNSGSATRRPGDDSLVGHYASGAPPAKRPKPYCRDV 908
            .|::.||.   |||...:    |.||.|..|:.|::|..||       .||.||.||.||.||||
Mosquito   900 INAIKRSP---SYAAGQIGLVGPGGPAGHGNNMSSSRDRGD-------GSGPPPIKRHKPICRDV 954

  Fly   909 SFSEASSKCTISDAAFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLL 973
            |.:|||...|::|.|||||||||||||:||::|||||||:|||||||.||..||||||.:|||||
Mosquito   955 SLAEASKYGTLNDYAFFDKVRKALRSPDVYEDFLRCLTLYNQEIVSKMELQTLVSPFLNRFPDLL 1019

  Fly   974 RWFTDFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNSSHDRGTSHQSAAEYVQDVDLSSCKRLGA 1038
            :||.|||||.:|...|...|.:||.|.   ...::....||     :.:|...|||||:||||||
Mosquito  1020 KWFQDFLGPSTGVGGGAANDCIPLTAA---AAAAARQDRDR-----TQSELAADVDLSTCKRLGA 1076

  Fly  1039 SYCALPQSTVPKKCSGRTALCREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRNIHRTEDER 1103
            ||||||:|....||||||.|||:||||.|||||||| ||||||||||||:||.||    |.||||
Mosquito  1077 SYCALPKSHEGVKCSGRTNLCRDVLNDTWVSFPTWA-EDSTFVTSRKTQYEEFIY----RCEDER 1136

  Fly  1104 FELDLVIEVNSATIRVLENLQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEII 1168
            ||||:|||.|||||||||.:|||::|||.:|:|:|.|||.|||||.||||||:.||||||:.:||
Mosquito  1137 FELDVVIETNSATIRVLEGVQKKLTRMSQDEVSRFRLDDCLGGTSTTIHQRALRRIYGDKAADII 1201

  Fly  1169 TGMKKNPFVAVPIVLKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRS 1233
            .|:||||.||||:||:|:|.||||||||||:||||||||||||||||||||.||||..|:|||||
Mosquito  1202 QGLKKNPSVAVPVVLRRMKAKEEEWREAQKSFNKQWREQNEKYYLKSLDHQGINFKQTDIKALRS 1266

  Fly  1234 KSLFNEIETLYDE-----RHDQEDDAM---EPFGPHLVLPYKDKTILDDAANLLIHHVKRQTGIQ 1290
            ||||||||||:||     ||:|.|||.   :..|||:.:||||||||:|||||||||||||||||
Mosquito  1267 KSLFNEIETLFDEVSYMKRHEQNDDAAAVPQASGPHMTIPYKDKTILEDAANLLIHHVKRQTGIQ 1331

  Fly  1291 KQEKQKIKQIIRQFVPDLFFAPRQPLSDDERDDAFPFLVDDNTKMDVD---SPLGRTESSTRNAK 1352
            ||||.:||.|:|||||||||||||.||:|||::.   ..|.:|:|:.|   |..|::.||.:.:.
Mosquito  1332 KQEKARIKHILRQFVPDLFFAPRQQLSEDEREEG---KNDKDTEMEQDEEVSSAGKSSSSGKKSS 1393

  Fly  1353 S-TPSESASPARSNASTSSVTPAGIKKETDDSKATTGSFAPASSATASSATPVD--------DAT 1408
            | .||.|.|.:.||.:.|| ..:|....||.|         |:|.:.|..|..|        ..|
Mosquito  1394 SNVPSFSGSNSTSNCNPSS-NASGAATSTDTS---------ATSTSVSEGTGKDGEGGNGGASKT 1448

  Fly  1409 PSTSSAAAAASAASSS----TVSGTEGKPKDDPLSSHKEEGAGS--TSSGVATSPRQAQDTAGAG 1467
            .|.||.:|...:|:||    |.||.|.       |..||:|.||  |:||...|......|    
Mosquito  1449 VSMSSTSADLQSATSSSTTVTSSGAEA-------SRTKEDGNGSSNTASGNDDSSTDKSTT---- 1502

  Fly  1468 VDVEIK-------LEHPADFSNPKL--------LPPHAHGQREDESYTLFFANNNWYLFLRLHAI 1517
            :.:|||       ::.||..|:...        |||||..:..:|:|||||.||:||||||||||
Mosquito  1503 IKIEIKEESDASMMQDPASASSGTTGQQPMSPPLPPHAVSKHIEEAYTLFFTNNSWYLFLRLHAI 1567

  Fly  1518 LCDRLHVMYERARLLAIEEERCRVNRRESTATALRLKPKPEIQVEDYYPTFLDMLKNVLDGNMDS 1582
            ||:||..:||||:::|.||......|..|||||||||||.||::|:||..|||||||:|||||:|
Mosquito  1568 LCERLRSIYERAQIIAAEERAYESTRNNSTATALRLKPKSEIRIEEYYNIFLDMLKNLLDGNMES 1632

  Fly  1583 NTFEDTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELFATEQRRGCTGGFCRDAH 1647
            :::|||:||||||:|||:||||:||.|||||||:|||||.||:|||||..|||||..||.||.|:
Mosquito  1633 SSYEDTLREMFGIHAYIAFTLDRVVQNAVRQLQHCVTERGALECVELFQAEQRRGGAGGLCRTAN 1697

  Fly  1648 KTFDREMSYQRKAESILNEENCFKVYIYKIDCRVTIELLDSEPEEVDKPAALKAQKFSKYVERLA 1712
            :....|::||||||:.|.:|||||:|||||||||||||||:|.::.....| ..|.:..||.||:
Mosquito  1698 RRIAAELAYQRKAEAALQDENCFKIYIYKIDCRVTIELLDTESDDTANNFA-STQAYGSYVNRLS 1761

  Fly  1713 NPAL------------GGGGNTG------------------------------------------ 1723
            |||.            ||||.:|                                          
Mosquito  1762 NPAATGTGSDSGGGGGGGGGGSGGGGGGVGSGGGSVAAANAAASGSSVTGGASGAGGVGNSGGGS 1826

  Fly  1724 --------------------------------RSDSALGNDSVVDGS----DIKTEADEDTAELR 1752
                                            .|.|:..|:|...||    ::|||..:  .||:
Mosquito  1827 GVAETGASVNSSSGSSSGGNNNHNSTPAGTTNSSSSSSSNNSAAGGSTGNAEVKTETPD--VELK 1889

  Fly  1753 YREGGIGGAGKARFLVRNKRRSKLLEEQVRQLFEHRRNRIEQH--GTAASLEPI----------- 1804
            .:: .:|......||.||.|.|:          :|...:|..:  |..|:|:.:           
Mosquito  1890 PQQ-LVGSTRMPVFLSRNARHSR----------KHTVGKISVNIEGNPATLKELQAGDAGEEISP 1943

  Fly  1805 ------------SVDSAISSNST----------------------------------TGG----- 1818
                        |..|:.||:||                                  |||     
Mosquito  1944 NSSKAAKASDANSSSSSFSSSSTSNGSKQQQSHSNVGGAEGEKQRALNESTSEATGATGGKVKFS 2008

  Fly  1819 ------------------------------------GG----SGTNNNNNNNNNNNS-------- 1835
                                                ||    ||.|||.||.|||||        
Mosquito  2009 QQEESGATTGKGETNPSSSPAAAAAAASATRDSCGNGGKAASSGNNNNLNNINNNNSICSTNKQL 2073

  Fly  1836 ----W-GGKRLERLGAPQ----VGLAEQ--YAFNDRDEISTNISNGRCFVTS----KNLKLLKYD 1885
                | ||..:::...|:    :..|::  ...:|.:::..|    |.|.|:    ||..:.:..
Mosquito  2074 DNPLWFGGSGVKKAPPPERLPCMNGADRNLLYIDDSEQMKVN----RTFKTNQVQKKNFTMYRPG 2134

  Fly  1886 AVRRAKKSHCRVTQAKYAHFQTYVNKWLQQHVSEQQQQNCVDWLLGKTADQINASGWGSASKTKT 1950
            |:.||:|||||||......|:..|:.||.|||:..|:..||||||||..|.:         |..|
Mosquito  2135 ALTRARKSHCRVTTRMNQRFKKVVDTWLDQHVTASQRAMCVDWLLGKRQDLM---------KNTT 2190

  Fly  1951 ---VQQKDTSKTPYRIYNRYRVVQ 1971
               ||....|:|||..||||:|.|
Mosquito  2191 SVIVQDNGLSRTPYAPYNRYKVDQ 2214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sin3ANP_001246282.1 Sin3 238..1719 CDD:227889 792/1724 (46%)
Sin3AXP_061516350.1 None

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