DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-b and AT5G33280

DIOPT Version :10

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_198313.2 Gene:AT5G33280 / 833300 AraportID:AT5G33280 Length:765 Species:Arabidopsis thaliana


Alignment Length:775 Identity:240/775 - (30%)
Similarity:394/775 - (50%) Gaps:90/775 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 PNRNINSSEPIFHLRS-RTAAASTPN----------YESLDYEVCENTLFQDEQRKR-LTERFSL 141
            ||.....|..:..|.| |.|..||..          .||||||:.||..|:.:.|.| ..|.|  
plant     2 PNSTTEDSVAVPLLPSLRRATNSTSQVAIVGANVCPIESLDYEIAENDFFKQDWRGRSKVEIF-- 64

  Fly   142 RKDIIRWIIFIQIGIITALIACTIDIIIEELSIRKYTFLYNSVKENVPLSDASDRDLLIPYLYWL 206
            :...::|::...||||.:||....::.:|.|:..|:.     |..|:.::..    ..:.::.:.
plant    65 QYVFMKWLLCFCIGIIVSLIGFANNLAVENLAGVKFV-----VTSNMMIAGR----FAMGFVVFS 120

  Fly   207 LFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKTLAVKAIGVITSVVGGLAGG 271
            :.:::...|.:.:..::.|..||||||:||:|||||..|.|..::||.:|.||.|::|...|..|
plant   121 VTNLILTLFASVITAFVAPAAAGSGIPEVKAYLNGVDAPEIFSLRTLIIKIIGNISAVSASLLIG 185

  Fly   272 KEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLGGGAAGVSAAFGAPIGGMLF 336
            |.|||:|.||.||:.:.||.|..:...:|..:.|::|.::||.|..|.|||::|:|.||:||:||
plant   186 KAGPMVHTGACVASILGQGGSKRYRLTWRWLRFFKNDRDRRDLVTCGAAAGIAASFRAPVGGVLF 250

  Fly   337 SLEEAASFWNQNLIWR----TLVASIISVFTLNIVLSAYHGLNDFTFTGLFNLGKFDTPLKFDYF 397
            :|||.:|:|...|:||    |.|.:|:....:::.||..        .|||..|..   :.||.:
plant   251 ALEEMSSWWRSALLWRIFFSTAVVAIVLRALIDVCLSGK--------CGLFGKGGL---IMFDVY 304

  Fly   398 E----------LPIFMILGVTGGLLGAAWNSLNTKI----NKFRKRFIPWKIGKVLEAVVVAMMG 448
            .          ||: ::|||.||:||:.:|.|..|:    |...::.:.|||      ::...:.
plant   305 SENASYHLGDVLPV-LLLGVVGGILGSLYNFLLDKVLRAYNYIYEKGVTWKI------LLACAIS 362

  Fly   449 VTLACLM--IYFINDCRPLGND-----PT----NNPVQLFCEDNEYNAVAALWFQTPEATVRSLF 502
            :..:||:  :.|:..|:|...|     ||    .|..:..|....||.:|:|.|.|.:..:::||
plant   363 IFTSCLLFGLPFLASCQPCPVDALEECPTIGRSGNFKKYQCPPGHYNDLASLIFNTNDDAIKNLF 427

  Fly   503 -HDPPGSHKILTLALFTVVYYVLSCATFGLNVSLGVFIPTALVGAAWGRLLAMLTYYVFPQAEFL 566
             .:........::.:|.|..:.||..::|:....|:|:|..:.||::||.:.||    ......|
plant   428 SKNTDFEFHYFSVLVFFVTCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGML----LGSNSNL 488

  Fly   567 HPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFFFP-LIIALISAKWVGDYFNEGIYDTQ 630
            :.|.:|::|||:.|||.:|||:|..|||:|.|  ......| :::.|:.:|.|.|.||..||:..
plant   489 NHGLFAVLGAASFLGGTMRMTVSTCVILLELT--NNLLLLPMMMVVLLISKTVADGFNANIYNLI 551

  Fly   631 IQVNHVPMLTWEPLPQYKGLKAREILSKPVICIKIRDSANYIYEMLKKCDHNGFPVVDDVCGDRR 695
            :::...|.|.....|..:.|...::::.|:......:....|..:||..:||||||||   |...
plant   552 MKLKGFPYLYSHAEPYMRQLLVGDVVTGPLQVFNGIEKVETIVHVLKTTNHNGFPVVD---GPPL 613

  Fly   696 SEGRVC-GIILRSQLIVILLKSLYVENKRFWLPETSIQTFRDLYP-----RFPSIKSVRKLDEKI 754
            :...|. |:|||:.::.:|.|.:::.:.......|..|...:.:.     |...|:.|...:|::
plant   614 AAAPVLHGLILRAHILTLLKKRVFMPSPVACDSNTLSQFKAEEFAKKGSGRSDKIEDVELSEEEL 678

  Fly   755 NYTVDLSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHLLVI-NHENR--IAGIITRRDFI 811
            |..:||..|.|.||..|....|:.:...:||.:|:|||||| ...||  :.||:||.||:
plant   679 NMYLDLHPFSNASPYTVVETMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFM 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 176/555 (32%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 52/169 (31%)
CBS repeat 657..763 CDD:341367 29/111 (26%)
CBS repeat 769..812 CDD:341367 19/46 (41%)
AT5G33280NP_198313.2 Voltage_gated_ClC 39..561 CDD:445960 176/556 (32%)
CBS_pair_voltage-gated_CLC_euk_bac 563..740 CDD:341367 54/179 (30%)
CBS repeat 569..687 CDD:341367 30/120 (25%)
CBS repeat 693..739 CDD:341367 19/46 (41%)

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