DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ClC-b and Clcn7

DIOPT Version :10

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_036060.1 Gene:Clcn7 / 26373 MGIID:1347048 Length:803 Species:Mus musculus


Alignment Length:823 Identity:387/823 - (47%)
Similarity:528/823 - (64%) Gaps:69/823 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDRKA--LITLDGESSAEDDPIILQKEAGPTSKAVQDFGLHQREEPSTSALARRATLSGNNHLLD 64
            ||.:.  |:...|:.. |:.|::  ..|||        |..|    |.|||.|...:  ||..||
Mouse    16 DDEEGAPLLRRTGQPD-EETPLL--NGAGP--------GARQ----SHSALFRIGQM--NNVELD 63

  Fly    65 DS--QPLLMGNNSVPPDIPINGSAGSPNRNINSSEPIFHLRSRTAAASTPNYESLDYEVCENTLF 127
            |.  .|.:...::.|.:||.|             |.:..|:          ||||||:..||.||
Mouse    64 DELLDPEVDPPHTFPKEIPHN-------------EKLLSLK----------YESLDYDNSENQLF 105

  Fly   128 QDEQRKRLTERFSLRKDIIRWIIFIQIGIITALIACTIDIIIEELSIRKYTFLYNSVKENVPLSD 192
            .:|:| |:........:|.||:|...|||:|.|:||.|||::|.|:..|    |..:|:|:    
Mouse   106 LEEER-RINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLK----YRVIKDNI---- 161

  Fly   193 ASDR-----DLLIPYLYWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGVKIPRIVRIKT 252
              |:     .|....|.|...:...|..|:.:|.:|||:.|||||||:|.:|||||||.:||:||
Mouse   162 --DKFTEKGGLSFSLLLWATLNSAFVLVGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKT 224

  Fly   253 LAVKAIGVITSVVGGLAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLG 317
            |.:|..|||.|||||||.||||||||:|:|:|||||||:||:..:||:||:.||.|.||||||..
Mouse   225 LVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSA 289

  Fly   318 GGAAGVSAAFGAPIGGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYHG-LNDFTFTG 381
            |.|||||||||||:||:||||||.||||||.|.||...||:||.||||.|||.||| :.|.:..|
Mouse   290 GAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPG 354

  Fly   382 LFNLGKFDT-PLKFDYFELPIFMILGVTGGLLGAAWNSLNTKINKFRKRFIPWKIGKVLEAVVVA 445
            |.|.|:||: .:.:...|:|:|:.:||.||:|||.:|:||..:..||.|:|.....:|:||::||
Mouse   355 LINFGRFDSEKMAYTIHEIPVFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVA 419

  Fly   446 MMGVTLACLMIYFINDCRPLGNDPTNNPVQLFCEDNEYNAVAALWFQTPEATVRSLFHDPPGSHK 510
            .:..|:|.::||...||:||.....:.|:||||.|.|||::||.:|.|||.:|.|||||||||:.
Mouse   420 AVTATVAFVLIYSSRDCQPLQGSSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYN 484

  Fly   511 ILTLALFTVVYYVLSCATFGLNVSLGVFIPTALVGAAWGRLLAMLTYYVFPQAEFLHPGKYALIG 575
            .:||.|||:||:.|:|.|:||.||.|||||:.|:|||||||..:...|:...|.:..||||||:|
Mouse   485 PMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYLTGAAIWADPGKYALMG 549

  Fly   576 AAANLGGVLRMTISLSVILMETTGVETSFFFPLIIALISAKWVGDYFNEGIYDTQIQVNHVPMLT 640
            |||.|||::|||:||:||:||.|. ..::.||:::.|::||.|||.|.||:||..||:..||.|.
Mouse   550 AAAQLGGIVRMTLSLTVIMMEATS-NVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLH 613

  Fly   641 WEPLPQYKGLKAREILSKPVICIKIRDSANYIYEMLK--KCDHNGFPVVDDVCGDRRSEGRVCGI 703
            ||.......|.|||::|.||.|::.|:....|.::|.  ..:|||||||:|| ||.: ..|:.|:
Mouse   614 WEAPVTSHSLTAREVMSTPVTCLRRREKVGIIVDVLSDTASNHNGFPVVEDV-GDTQ-PARLQGL 676

  Fly   704 ILRSQLIVILLKSLYVENKRFWLPE--TSIQTFRDLYPRFPSIKSVRKLDEKINYTVDLSMFMNP 766
            ||||||||:|...::||.....|.:  ..::.|||.|||||.|:|:....::...|:|||.||||
Mouse   677 ILRSQLIVLLKHKVFVERSNMGLVQRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNP 741

  Fly   767 SPIRVNPHDSVPRIFQIFRALGLRHLLVINHENRIAGIITRRD 809
            ||..|....|:||:|::|||||||||:|:::.|::.|::||:|
Mouse   742 SPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVGLVTRKD 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 279/530 (53%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 75/162 (46%)
CBS repeat 657..763 CDD:341367 46/109 (42%)
CBS repeat 769..812 CDD:341367 20/41 (49%)
Clcn7NP_036060.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 10/40 (25%)
ClC_6_like 93..618 CDD:239657 282/536 (53%)
Selectivity filter part_1. /evidence=ECO:0000250 201..205 3/3 (100%)
Selectivity filter part_2. /evidence=ECO:0000250 243..247 3/3 (100%)
Selectivity filter part_3. /evidence=ECO:0000250 510..514 3/3 (100%)
CBS_pair_voltage-gated_CLC_euk_bac 624..788 CDD:341367 75/163 (46%)
CBS repeat 630..738 CDD:341367 46/109 (42%)
CBS repeat 744..787 CDD:341367 20/41 (49%)

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