DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-b and ClC-b

DIOPT Version :10

Sequence 1:NP_610798.1 Gene:ClC-b / 36381 FlyBaseID:FBgn0033755 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_308378.5 Gene:ClC-b / 1269729 VectorBaseID:AGAMI1_010294 Length:760 Species:Anopheles gambiae


Alignment Length:767 Identity:465/767 - (60%)
Similarity:583/767 - (76%) Gaps:21/767 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LSGNNHLLD----DSQPLL---MGNNSVPPDIPINGSAGSPNRNINSS-EPIFHLRSRTAAASTP 112
            :|....|:|    |.:.||   :.|...|.:.|.:.:..:.|.:.:.. :|.|:|..|:..||  
Mosquito     1 MSPGVRLIDVDSSDEENLLEEGVRNRRSPRNEPTDFNIPATNDDDDDDVDPAFNLNRRSKEAS-- 63

  Fly   113 NYESLDYEVCENTLFQDEQRKRLTERFSLRKDIIRWIIFIQIGIITALIACTIDIIIEELSIRKY 177
            .||||||:||||.|::.:|.| :..:|::|||..||:|.:|||:.|||:||.|:|:|||:|..||
Mosquito    64 QYESLDYDVCENVLWRRDQTK-IKPKFTVRKDFSRWVISLQIGVCTALVACCINIVIEEVSRLKY 127

  Fly   178 TFLYNSVKENVPLSDASDRDLLIPYLYWLLFSIVPVAFGAAMVTYIEPITAGSGIPQVKSYLNGV 242
            .||...|..||     ...||.||||||.|.::|||..||.:|.|:||:.|||||||||.|||||
Mosquito   128 GFLKRQVDANV-----LHGDLSIPYLYWSLLNLVPVVIGATLVAYVEPVAAGSGIPQVKCYLNGV 187

  Fly   243 KIPRIVRIKTLAVKAIGVITSVVGGLAGGKEGPMIHAGAVVAAGISQGKSTTFLKDFRIFKAFRD 307
            |:|||||||||||||:||.|||:|||||||||||||:|||:||||||||||||.:|.:|.:.|||
Mosquito   188 KVPRIVRIKTLAVKAVGVATSVIGGLAGGKEGPMIHSGAVIAAGISQGKSTTFRRDLKILQHFRD 252

  Fly   308 DHEKRDFVLGGGAAGVSAAFGAPIGGMLFSLEEAASFWNQNLIWRTLVASIISVFTLNIVLSAYH 372
            ||||||||:||.||||:|||||||||:|||||||||||||:|||||..|||||.|||||:|||||
Mosquito   253 DHEKRDFVVGGAAAGVAAAFGAPIGGILFSLEEAASFWNQSLIWRTFFASIISSFTLNIILSAYH 317

  Fly   373 GLNDFTFTGLFNLGKFDTPLKFDYFELPIFMILGVTGGLLGAAWNSLNTKINKFRKRFIPWKIGK 437
            ||:.|.:.||||||:| .||.|:|:||||||::||.||..||.||:||:::|.||...|..:..|
Mosquito   318 GLSSFRYRGLFNLGEF-APLPFEYYELPIFMLMGVIGGCTGALWNALNSRLNMFRAHAIRQRWAK 381

  Fly   438 VLEAVVVAMMGVTLACLMIYFINDCRPLGNDPTNNPVQLFCEDNEYNAVAALWFQTPEATVRSLF 502
            ||||..||::|.|.||||.|.||||||||||||..||||||:||||||.||||||||||||::||
Mosquito   382 VLEAAFVAVLGATFACLMAYTINDCRPLGNDPTEQPVQLFCQDNEYNAAAALWFQTPEATVKALF 446

  Fly   503 HDPPGSHKILTLALFTVVYYVLSCATFGLNVSLGVFIPTALVGAAWGRLLAMLTYYVFPQA-EFL 566
            |||||||||||||.|.::||.|||.|:||:||||:||||.|:|||||||:|..|...||.: .|:
Mosquito   447 HDPPGSHKILTLATFVLIYYPLSCVTYGLSVSLGIFIPTLLIGAAWGRLIASFTVLAFPTSIAFV 511

  Fly   567 HPGKYALIGAAANLGGVLRMTISLSVILMETTGVETSFFFPLIIALISAKWVGDYFNEGIYDTQI 631
            .|||||||||||.||||:|||:||||||:|||| ...|..|:|:.|::|||.|||||||||||||
Mosquito   512 SPGKYALIGAAAQLGGVVRMTLSLSVILLETTG-NIGFILPIILTLMTAKWSGDYFNEGIYDTQI 575

  Fly   632 QVNHVPMLTWEPLPQYKGLKAREILSKPVICIKIRDSANYIYEMLKKCDHNGFPVVDDVCGDRRS 696
            :.:.||||.|...|:|:.|.||.|:::||:|::..:...|:.::||...|||||||:|.....|.
Mosquito   576 RTSRVPMLPWHVEPEYQNLSARHIMARPVVCVRTEEKVQYLLDILKNTTHNGFPVVEDGDDGSRV 640

  Fly   697 EGRVCGIILRSQLIVILLKSLYVENKRFWLPETSIQTFRDLYPRFPSIKS--VRKLDEKINYTVD 759
            .||:.|:||||||:|||.:|.|||:.|||....||:.|||.|||:|:::.  |.:.....:::|:
Mosquito   641 NGRLIGLILRSQLVVILKRSFYVESSRFWESTVSIEAFRDEYPRYPAVEDLHVNEYKRSGSFSVN 705

  Fly   760 LSMFMNPSPIRVNPHDSVPRIFQIFRALGLRHLLVINHENRIAGIITRRDFI 811
            ::|||||||..|....|||||||:|||||||||:|::.|||:.|||||:||:
Mosquito   706 MNMFMNPSPYSVEEGTSVPRIFQLFRALGLRHLVVVSSENRVRGIITRKDFL 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-bNP_610798.1 ClC_6_like 115..639 CDD:239657 359/524 (69%)
CBS_pair_voltage-gated_CLC_euk_bac 652..813 CDD:341367 83/162 (51%)
CBS repeat 657..763 CDD:341367 45/107 (42%)
CBS repeat 769..812 CDD:341367 28/43 (65%)
ClC-bXP_308378.5 None

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