DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and usp24

DIOPT Version :10

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_002931653.2 Gene:usp24 / 100497137 XenbaseID:XB-GENE-6035156 Length:2577 Species:Xenopus tropicalis


Alignment Length:967 Identity:192/967 - (19%)
Similarity:327/967 - (33%) Gaps:357/967 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKQNN-----------SEAGDNASDNAGGAGNGIPPNAKPMSANGMANAEENVLPKGMDTGSPAG 56
            :|::|           |.:|.|.|  :|..|.....:|.........:.::.::         ||
 Frog  1317 IKESNTLFPAGLRSRLSSSGSNCS--SGSEGESTSLHAWICVRQQSVSTKDAII---------AG 1370

  Fly    57 ESLNSNRSGKRDIKALLAYLQSIDMPEQG--HNVMAICERVIVDLARLQIPRGASCPRLKEDVC- 118
            |:|           :||.....:...:.|  :|:.::.:..|      .|..|:....::...| 
 Frog  1371 EAL-----------SLLVTCLQLRSQQLGSFYNLPSVADFTI------DILLGSPSAEIRRVACD 1418

  Fly   119 QVGAFLATRNEKFHQ-----MFYLRVVYELITKSPFEPPPSC-------AVAIVFQLFD-STQIL 170
            |:.....|....:.:     :|.|.|:  |..:.|...|.|.       .:|...:.|| ..|:|
 Frog  1419 QLYTLSQTDTSSYPEVQKPNLFLLTVI--LSAQLPLWSPTSIMRGINQRLLAQCTEYFDLRCQLL 1481

  Fly   171 EAVH-SLLEQ-NVQDSSIKKTVNLLCDWITY-----------CTFCSTLNLWV---LALLKGLRD 219
            :.:. |.:|| ||..::      :|.|.||:           |......|:|:   |.|:|.|  
 Frog  1482 DDLTCSEMEQLNVSPAT------MLEDEITWLDNFEPNRTAECETSEADNVWLAGHLRLIKTL-- 1538

  Fly   220 QGKMALLDEIAMDNIEKLFHVMIFPALRQ--------KAAPVVFHMLS-----TINQTPEVFHKI 271
                     :::...||   .|:.|:|.:        :|:.::.:..|     .|:|  :.||. 
 Frog  1539 ---------LSLCGAEK---EMLGPSLIKQLLDDFLFRASRIILNSHSPAGSAAISQ--QDFHP- 1588

  Fly   272 LPRIPRVLQYVKNQSTTMDEIGLETKKCLQQLVDLTSALMLRFYDQDELYVATKKALQT-YEPSP 335
                         :.:||:. .|...:.|..|.:.:.|         .|.:.||:.|.. ::|.|
 Frog  1589 -------------KCSTMNS-RLAAYEVLVMLAESSLA---------NLQLITKELLSMHHQPDP 1630

  Fly   336 NCVALAKAMHENAQPWGRRNAR-VGLVNLGNTCYMNSVLQALAMTSDFSRQILLIECNS-----V 394
               |:.|..........|.|:. |||.|.|.|||||:|.|.|.|.......:|.:|.::     .
 Frog  1631 ---AVTKEFDYLPPVDSRSNSGFVGLKNGGATCYMNAVFQQLYMQPGLPEALLSMEGDTDNPDES 1692

  Fly   395 LLMKVQQQIA-LMHHSLRYELTPSRVLNATRPPSFTPGL-----------QQDSSEFLGYLLDLL 447
            :..:||.... ||...|:|.:          |.:|....           |||:.||...|:|.:
 Frog  1693 VFYQVQSLFGHLMESKLQYYI----------PENFWKIFKMWNKELYVREQQDAYEFFTSLIDQM 1747

  Fly   448 HEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTP 512
            .|:                                                              
 Frog  1748 DEY-------------------------------------------------------------- 1750

  Fly   513 TPPATPTKATNGLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPD 577
                        ||:.|::       .....||.|..|....|.:|......|::|..|.|    
 Frog  1751 ------------LKKMGRE-------QIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNL---- 1792

  Fly   578 DKEDCGATN-YSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQF-- 639
                 |.|: .|::..::.:...|.|:|.|.|:|.:||......:...:...|..|::.|.:|  
 Frog  1793 -----GVTSCQSLEISLDQFVRGEILEGSNAYYCEKCKDKRTTVKRTCIKSLPSVLVIHLMRFGF 1852

  Fly   640 --------KYDQKYHFRTKLMHKVFHDESVTVK-MSAKDSLQEMS-------------------T 676
                    |||::..|...|     :.|..||. |:.:||..|..                   |
 Frog  1853 DWESGRSIKYDEQIKFPWML-----NMEPYTVAGMARQDSSCEAGENGRHIDPGGGSPRKKVAPT 1912

  Fly   677 VHYDLYAGVVHAGYSMDSGHYFTFAADQAKN----WYKFNDNVVT----------------HSKP 721
            .:|:|...:||:|.: .:|||::|..|:..:    ||||||.||.                ..:|
 Frog  1913 ENYELVGVIVHSGQA-HAGHYYSFIKDRRGSGKGKWYKFNDTVVEEFDLNDETIEYECFGGEYRP 1976

  Fly   722 EEMHNLTSPN--------TPYILFYKMCGHSNESNSVTASCSSSMVSGSNDQVVSVPLSPPLK-- 776
             ::::.::|.        ..|:|||:.....|.......|..|.:...:.|..:|.|.||.:.  
 Frog  1977 -KVYDQSNPYPDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEAEDLSLSAPSSPDISPQ 2040

  Fly   777 ----------------------------LEELPRRLRDYVRKDN-------HVYNEE 798
                                        :|::|.|:...||.:|       .|||.:
 Frog  2041 SSPRPHRPNDRLSILTKLVRKGEKKGLFVEKIPLRIYQTVRDENLKFMKNRDVYNSD 2097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 Peptidase_C19H 359..739 CDD:239129 95/455 (21%)
usp24XP_002931653.2 UBA_UBP24 6..42 CDD:270472
Ubl_UBP24 917..995 CDD:340585
peptidase_C19C 1649..2005 CDD:239124 97/462 (21%)
Blue background indicates that the domain is not in the aligned region.

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