DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or49a and Or43b

DIOPT Version :10

Sequence 1:NP_523711.3 Gene:Or49a / 36350 FlyBaseID:FBgn0033727 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:352 Identity:71/352 - (20%)
Similarity:138/352 - (39%) Gaps:62/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LAGSPSKIMRQGLHFFYMLSS---QLKFITFMINRKRLLQLSHRLKEL--YPHKEQNQRKYE--- 122
            ||..|.:::.|.|..  .|::   .|||.|.::...||...:....||  |..|...:||..   
  Fly    72 LAEFPPELLLQSLQL--CLNTWCFALKFFTLIVYTHRLELANKHFDELDKYCVKPAEKRKVRDMV 134

  Fly   123 --VNKYYLSCSTRNVLYVYYFVMVVMALEPLVQSCIMYLIGFGKADFTYKRIFPTRLTFDSEKPL 185
              :.:.||   |..|:||.|      |...|:...:.:.:       .|...:|. :.:..::..
  Fly   135 ATITRLYL---TFVVVYVLY------ATSTLLDGLLHHRV-------PYNTYYPF-INWRVDRTQ 182

  Fly   186 GYVLAYVIDFTYSQFIVNVSLGTDLWMMCVSSQISMHLGYLANMLASIRPSPETEQQDCDF---- 246
            .|:.:::..||.. :.:.|:..||.:.:...:.:..|:..|.:.:..:.........|..:    
  Fly   183 MYIQSFLEYFTVG-YAIYVATATDSYPVIYVAALRTHILLLKDRIIYLGDPSNEGSSDPSYMFKS 246

  Fly   247 LASIIKRHQLMIRLQKDVN-YVFGLLLASNLFTTSCLLCCMAYYTVVEGFNWEGISYMMLFASVA 310
            |...||.|:.|:.....:. .:.|.:.|..:...|.|...|.              .|:|||..:
  Fly   247 LVDCIKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMI--------------NMVLFADQS 297

  Fly   311 AQF----YVVS---------SHGQMLIDLSTNLAKAAFESKWYEGSLRYKKEILILMAQAQRPLE 362
            .:|    ||::         .:...::|....||.|.|.|.|:....||::.::..:.:.|:|:.
  Fly   298 TRFGIVIYVMAVLLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFLQKLQQPMT 362

  Fly   363 ISARGVIIISLDTFKILMTITYRFFAV 389
            .:|..:..|:|.|...:....:..:|:
  Fly   363 FTAMNIFNINLATNINVAKFAFTVYAI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or49aNP_523711.3 7tm_6 88..384 CDD:251636 64/320 (20%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 64/320 (20%)

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