DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and cyth3a

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_001342037.2 Gene:cyth3a / 100002190 ZFINID:ZDB-GENE-120612-1 Length:396 Species:Danio rerio


Alignment Length:204 Identity:69/204 - (33%)
Similarity:123/204 - (60%) Gaps:5/204 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   632 ITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRENPGLDKKMIG 696
            :|..:..|..|:.:.::.|.::||..|:||||:|.|:.:|  :..|..:|.||.:..||:|.:||
Zfish    52 LTCVRETKSTQRSKQIAVGRKKFNMDPKKGIQFLLENDLL--QHTPEDIAQFLYKGEGLNKTVIG 114

  Fly   697 EYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQD 761
            :|:.::.:.:.::|..||:..:|..|.:.||||.:|.:|||||||..|..::|.::..:.:.|..
Zfish   115 DYLGERDDFNIRVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAYAARYCQCNPG 179

  Fly   762 PFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIK 826
            .|.:.|..:.|::::||||...||.|.:  :.| ::|.|....||:|.|.|..:|:|..::.:||
Zfish   180 VFQSTDTCYVLSFSVIMLNTSLHNPNVR--DKP-SVERFISMNRGINEGGDLPEELLRNLYESIK 241

  Fly   827 NEEIVMPAE 835
            ||...:|.:
Zfish   242 NEPFKIPED 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 69/204 (34%)
Sec7 643..830 CDD:460178 65/186 (35%)
cyth3aXP_001342037.2 Sec7 63..245 CDD:460178 65/186 (35%)
PH_GRP1-like 260..379 CDD:269954
Blue background indicates that the domain is not in the aligned region.

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