DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG30046 and CG42339

Sequence 1:NP_001286341.1 Gene:CG30046 FlyBaseID:FBgn0050046 Length:839 Species:Drosophila melanogaster
Sequence 2:NP_572674.3 Gene:CG42339 FlyBaseID:FBgn0259241 Length:395 Species:Drosophila melanogaster

Alignment Length:144 Identity:38/145 (26%)
Similarity:55/145 (38%) Gaps:30/145 (21%)


  Fly   425 PWSSWSDC--SSKCGVGMQYRRRVYKQPELARVYNCNEAQ-YEEREC--QGEMCGQNNLMREPEE 484
            |:.|...|  :..|..|......|.|.|..|.:.:.::.. |.:..|  .|:.|         ::
  Fly    19 PFVSGGSCREAQLCCNGRDSSCVVQKAPINAIIEDLSDKPCYCDHACLKLGDCC---------DD 74

  Fly   485 FEDLEPDPRRIGYQPSQQRRAECELSSWGSWSPCSVTCGDGYEMRQRQYLNPQAEFDCQGVHRME 549
            |:|      ..|.       .:|::..||:||.|..:||.|...|.||.|.....   .|.|...
  Fly    75 FKD------HCGV-------LDCQVGDWGAWSECDRSCGTGMMTRNRQILQAAQN---GGKHCPT 123

  Fly   550 LQETRKCSGRDCLG 563
            ||:.|.|.|..|.|
  Fly   124 LQQKRSCQGYRCHG 137

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG30046NP_001286341.1 Reeler 28..167 CDD:260081
Spond_N 194..382 CDD:283999
TSP1 425..473 CDD:214559 12/53 (23%)
TSP1 510..561 CDD:214559 19/51 (37%)
CG42339NP_572674.3 Somatomedin_B <53..79 CDD:279385 6/41 (15%)
TSP1 86..136 CDD:214559 20/53 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG3539
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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