Protein Alignment SkpB and AT5G42190

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_568603.1
• Gene: AT5G42190 / 834224
• AraportID: AT5G42190
• Length: 171
• Species: Arabidopsis thaliana
• Alignment Length: 171
• Identity: 86/171 - (50%)
• Similarity: 114/171 - (66%)
• Gaps: 26/171 - (15%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPV 68
            |.|:|:|.|.|:.|:.:|..|:||:..|||  |.:||.: |||||.|.||.||:.:...|
plant     7 ITLKSSDGENFEIDEAVALESQTIKHMIED--DCTDNGI-PLPNVTSKILSKVIEYCKRH----- 63

  Fly    69 VTEEVENKEKRTD-----------------DISSWDADFLKVDQGTLFELILAANYLNIQGLLDV 116
             .|..|..|...|                 |:.:||::|:||||||||:||||||||||:||||:
plant    64 -VEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDL 127

  Fly   117 TCKTVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
            ||:|||:|||||:|:.||.||.|:|||.|:|||:||:||:|
plant   128 TCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQW 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	63/137 (46%)
		Skp1	111..158	CDD:460222	32/47 (68%)
AT5G42190	NP_568603.1	BTB_POZ_SKP1	6..136	CDD:349631	63/137 (46%)
		Skp1	122..169	CDD:460222	32/47 (68%)