Protein Alignment SkpB and AT5G42190

DIOPT Version :9

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_568603.1
• Gene: AT5G42190 / 834224
• AraportID: AT5G42190
• Length: 171
• Species: Arabidopsis thaliana
• Alignment Length: 171
• Identity: 86/171 - (50%)
• Similarity: 114/171 - (66%)
• Gaps: 26/171 - (15%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPV 68
            |.|:|:|.|.|:.|:.:|..|:||:..|||  |.:||.: |||||.|.||.||:.:...|
plant     7 ITLKSSDGENFEIDEAVALESQTIKHMIED--DCTDNGI-PLPNVTSKILSKVIEYCKRH----- 63

  Fly    69 VTEEVENKEKRTD-----------------DISSWDADFLKVDQGTLFELILAANYLNIQGLLDV 116
             .|..|..|...|                 |:.:||::|:||||||||:||||||||||:||||:
plant    64 -VEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDL 127

  Fly   117 TCKTVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
            ||:|||:|||||:|:.||.||.|:|||.|:|||:||:||:|
plant   128 TCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQW 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	86/171 (50%)
		Skp1	1..110	CDD:214704	52/122 (43%)
		Skp1	84..158	CDD:279768	53/74 (72%)
AT5G42190	NP_568603.1	BTB_POZ_SKP1	6..136	CDD:349631	63/137 (46%)
		Skp1	122..169	CDD:396171	32/47 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	60	1.000	Domainoid score	I3858
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		mtm992
orthoMCL	1	0.900	-	-		OOG6_100934
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840