Protein Alignment SkpB and SK13

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_567090.1
• Gene: SK13 / 825171
• AraportID: AT3G60010
• Length: 154
• Species: Arabidopsis thaliana
• Alignment Length: 159
• Identity: 72/159 - (45%)
• Similarity: 100/159 - (62%)
• Gaps: 15/159 - (9%)

  Fly     3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYH--KD 65
            ::.|.|:|.|.|..::.:|..|:||...|||  |...|.| |:.||..:||.||:.:...|  .|
plant     4 MVMLLSSDGESFQVEEAVAVQSQTIAHMIED--DCVANGV-PIANVTGVILSKVIEYCKKHVVSD 65

  Fly    66 DPVVTEEVENKEKRTDDISSWDADFLKV--DQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            .|  |||.:      |::..|||:|:|.  ...|||:::||||||||:.|||:.|:|||:||.||
plant    66 SP--TEESK------DELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGK 122

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
            .|..||....|:|||.|:|||::||||:|
plant   123 KPDEIRALLGIENDFTPEEEEEIRKENQW 151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	52/125 (42%)
		Skp1	111..158	CDD:460222	27/47 (57%)
SK13	NP_567090.1	BTB_POZ_SKP1	4..119	CDD:349631	52/125 (42%)
		Skp1	105..152	CDD:460222	27/47 (57%)