Protein Alignment SkpB and SK15

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_566773.1
• Gene: SK15 / 822152
• AraportID: AT3G25650
• Length: 177
• Species: Arabidopsis thaliana
• Alignment Length: 163
• Identity: 72/163 - (44%)
• Similarity: 107/163 - (65%)
• Gaps: 13/163 - (7%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPV 68
            |.|.|:|.|.|..::.:|:..:.::..:||  |...|.: ||.||...||..||.:...|.|| |
plant     6 IVLTSSDGESFQVEEVVARKLQIVKHLLED--DCVINEI-PLQNVTGNILSIVLEYCKKHVDD-V 66

  Fly    69 VTEEV--ENKEKRTDD-----ISSWDADFLK-VDQGTLFELILAANYLNIQGLLDVTCKTVANMI 125
            |.::.  |.|:|:.||     :.:|||:|:| :|..|:|:|||||||||::|||.:||:|||:.|
plant    67 VDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYI 131

  Fly   126 KGKSPQAIRDTFAIQNDFLPQEEEQ-VRKENEW 157
            |.|:|:.:|:.|.|:|||..:|||: :||||.|
plant   132 KDKTPEEVRELFNIENDFTHEEEEEAIRKENAW 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	54/128 (42%)
		Skp1	111..158	CDD:460222	26/48 (54%)
SK15	NP_566773.1	BTB_POZ_SKP1	5..131	CDD:349631	54/128 (42%)
		Skp1	117..165	CDD:460222	26/48 (54%)