Protein Alignment SkpB and SK3

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_565604.1
• Gene: SK3 / 817111
• AraportID: AT2G25700
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 162
• Identity: 74/162 - (45%)
• Similarity: 102/162 - (62%)
• Gaps: 15/162 - (9%)

  Fly     3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKD-- 65
            :|.|:|:|.|.|:.::.:|..|:||:..|||  |..||.: |||||...||.||:.:...|.:
plant     7 MIILKSSDGESFEVEEAVAVESQTIKHMIED--DCVDNGI-PLPNVTGAILAKVIEYCKKHVEAA 68

  Fly    66 -----DPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMI 125
                 |.......||.|.:|     ||.||:|||..|||:|:.|||||||.||||:|||.||:.:
plant    69 AEAGGDKDFYGSTENHELKT-----WDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQM 128

  Fly   126 KGKSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
            :||:|..:|:.|.|:||:.|:||.:||.||.|
plant   129 RGKTPAQMREHFNIKNDYTPEEEAEVRNENRW 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	58/128 (45%)
		Skp1	111..158	CDD:460222	25/47 (53%)
SK3	NP_565604.1	BTB_POZ_SKP1	7..128	CDD:349631	58/128 (45%)
		Skp1	115..161	CDD:460222	25/46 (54%)