Protein Alignment SkpB and skp1

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_957037.1
• Gene: skp1 / 393716
• ZFINID: ZDB-GENE-040426-1707
• Length: 163
• Species: Danio rerio
• Alignment Length: 163
• Identity: 112/163 - (68%)
• Similarity: 134/163 - (82%)
• Gaps: 2/163 - (1%)

  Fly     1 MPIIRLESADKEIFDTDQEIAKCSETIRIAIEDLG--DESDNSVLPLPNVNSLILKKVLHWATYH 63
            ||.|:|:|:|.|:|:.|.||||.|.||:..:||||  ||.|:..:||||||:.|||||:.|.|:|
Zfish     1 MPTIKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65

  Fly    64 KDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            ||||...|:.||||||||||..||.:|||||||||||||||||||:|:|||||||||||||||||
Zfish    66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 130

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRKENEWCEDK 161
            :|:.||.||.|:|||..:||.||||||:|||:|
Zfish   131 TPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	84/123 (68%)
		Skp1	111..158	CDD:460222	34/46 (74%)
skp1	NP_957037.1	BTB_POZ_SKP1	3..127	CDD:349631	84/123 (68%)
		Skp1	113..160	CDD:460222	34/46 (74%)