Protein Alignment SkpB and skr-16

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_501128.2
• Gene: skr-16 / 191765
• WormBaseID: WBGene00004822
• Length: 181
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 54/155 - (34%)
• Similarity: 78/155 - (50%)
• Gaps: 11/155 - (7%)

  Fly     3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDP 67
            |..|.|:|.|.|.||....:.|:.:..|.:.|  |:.::.:.:..|....|.:||.|...|:||.
 Worm    31 IFILISSDGEKFQTDGHCIRHSKVLMQASKSL--ETPDTPIQVEKVQGDTLNRVLEWCNNHRDDG 93

  Fly    68 VVTEEVENKEKRTDDISSWDADFLK-VDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKSPQ 131
            ....:.....:    :..||..:|| :|...|.:||.|:|.|.:|.|:|..|||||||.|||:|.
 Worm    94 KYVSQCGPSLR----LPQWDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKTVANMAKGKNPA 154

  Fly   132 AIRDTFAIQNDFLPQEEEQVRKENE 156
            .:|:.|.|..|    |||.....||
 Worm   155 QLRELFGILTD----EEEAELALNE 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	40/122 (33%)
		Skp1	111..158	CDD:460222	23/46 (50%)
skr-16	NP_501128.2	BTB_POZ_SKP1	31..148	CDD:349631	40/122 (33%)
		Skp1	134..>165	CDD:460222	17/30 (57%)