Protein Alignment SkpB and skr-16

DIOPT Version :9

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_501128.2
• Gene: skr-16 / 191765
• WormBaseID: WBGene00004822
• Length: 181
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 54/155 - (34%)
• Similarity: 78/155 - (50%)
• Gaps: 11/155 - (7%)

  Fly     3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDP 67
            |..|.|:|.|.|.||....:.|:.:..|.:.|  |:.::.:.:..|....|.:||.|...|:||.
 Worm    31 IFILISSDGEKFQTDGHCIRHSKVLMQASKSL--ETPDTPIQVEKVQGDTLNRVLEWCNNHRDDG 93

  Fly    68 VVTEEVENKEKRTDDISSWDADFLK-VDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKSPQ 131
            ....:.....:    :..||..:|| :|...|.:||.|:|.|.:|.|:|..|||||||.|||:|.
 Worm    94 KYVSQCGPSLR----LPQWDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKTVANMAKGKNPA 154

  Fly   132 AIRDTFAIQNDFLPQEEEQVRKENE 156
            .:|:.|.|..|    |||.....||
 Worm   155 QLRELFGILTD----EEEAELALNE 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	54/155 (35%)
		Skp1	1..110	CDD:214704	31/107 (29%)
		Skp1	84..158	CDD:279768	34/74 (46%)
skr-16	NP_501128.2	Skp1	30..133	CDD:214704	31/107 (29%)
		Skp1	106..>165	CDD:279768	28/58 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160691
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850