Protein Alignment SkpB and skr-19

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_510193.4
• Gene: skr-19 / 181446
• WormBaseID: WBGene00004825
• Length: 155
• Species: Caenorhabditis elegans
• Alignment Length: 157
• Identity: 52/157 - (33%)
• Similarity: 77/157 - (49%)
• Gaps: 25/157 - (15%)

  Fly     2 PII--RLESADKEIFDTDQE----IAKCSETIRIAIEDL--GDESDNSVLPLPNVNSLILKKVLH 58
            |:|  :|.|.|.:.|..|:.    |.:..:..|.|..||  .|:.....|.:|   :.:::||:.
 Worm     6 PVILYKLRSTDGQRFLADRRTIGMIGRIEDLFRNAGLDLIPADQLQPIQLEIP---ATVMRKVIE 67

  Fly    59 WATYHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVAN 123
            |..:||.||...|    .|..|:||..|||.||.|....||::|.||....:.||..:.|:.|
 Worm    68 WCDHHKHDPPYDE----SEPETNDIPDWDASFLMVRHNMLFDIIRAARDFTVPGLFAMCCRVV-- 126

  Fly   124 MIKGKSPQAIRDTFAIQNDFLPQEEEQ 150
               |::|:.|.|  .:.||   :||||
 Worm   127 ---GQNPREIID--GLVND---EEEEQ 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	41/129 (32%)
		Skp1	111..158	CDD:460222	14/40 (35%)
skr-19	NP_510193.4	BTB_POZ_SKP1	9..129	CDD:349631	41/131 (31%)