Protein Alignment SkpB and skr-20

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_510192.1
• Gene: skr-20 / 181445
• WormBaseID: WBGene00004826
• Length: 173
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 45/158 - (28%)
• Similarity: 84/158 - (53%)
• Gaps: 17/158 - (10%)

  Fly     2 PIIRLESADKEIFDTDQEIAKCSETIRIAIEDLG------DESDNSVLPLPNVNSLILKKVLHWA 60
            |:.:|:|.|.:||:.::...|....|.....|.|      :.:|..::|.   :|.|::.|:.|.
 Worm     8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPF---HSSIVQAVIEWL 69

  Fly    61 TYHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMI 125
            .:::|:|:...:   .:.|..|.|.||..|..|:.|.||.|:.|::.|.::.|:::.|...|.:|
 Worm    70 YHYQDNPLARRD---SKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAELI 131

  Fly   126 KGKSPQAIRDTFAIQNDFLPQEEEQVRK 153
            :|||.:.||..:.|::|     |||:.:
 Worm   132 RGKSTEEIRKIYGIRSD-----EEQMEE 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	33/127 (26%)
		Skp1	111..158	CDD:460222	14/43 (33%)
skr-20	NP_510192.1	Skp1	7..116	CDD:214704	31/113 (27%)
		Skp1	117..>155	CDD:460222	14/43 (33%)