Protein Alignment SkpB and skr-3

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_507059.1
• Gene: skr-3 / 180081
• WormBaseID: WBGene00004809
• Length: 167
• Species: Caenorhabditis elegans
• Alignment Length: 162
• Identity: 82/162 - (50%)
• Similarity: 110/162 - (67%)
• Gaps: 9/162 - (5%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNS----VLPLPNVNSLILKKVLHWATYHK 64
            |:|.|:|.:.|...:::...|:||...|::||.|...|    .:||..|.|.||:|::.|..:|.
 Worm    10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHA 74

  Fly    65 DD-PVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            || |...:|    .|:|.|||.|||:|:|||||||||:|||||||:|:||||||.:.||||:|||
 Worm    75 DDEPKKVDE----NKKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGK 135

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRKENEWCED 160
            :|..||..|.|:|||..:|.|.::|||.||||
 Worm   136 TPSQIRTLFNIENDFSEEEREAMKKENAWCED 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	61/125 (49%)
		Skp1	111..158	CDD:460222	26/46 (57%)
skr-3	NP_507059.1	BTB_POZ_SKP1	10..132	CDD:349631	61/125 (49%)
		Skp1	118..165	CDD:460222	26/46 (57%)