Protein Alignment SkpB and skr-13

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_503042.1
• Gene: skr-13 / 178493
• WormBaseID: WBGene00004819
• Length: 172
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 55/155 - (35%)
• Similarity: 85/155 - (54%)
• Gaps: 6/155 - (3%)

  Fly     3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDN----SVLPLPNVNSLILKKVLHWATYH 63
            :.::.|:|..:....::..:.|:|:...||:||...:|    ..:|:.|||...:.||......|
 Worm    14 VYKIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAELCEKH 78

  Fly    64 KDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            |.| .:.|:..|..| |..|..||..|||::...||:||||:|:|:|:||:...||||:||.|||
 Worm    79 KAD-AIPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGK 141

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRK 153
            :...:|:.|.|..|.....||..:|
 Worm   142 TTAELREIFGINTDEQDAAEETAQK 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	44/125 (35%)
		Skp1	111..158	CDD:460222	18/43 (42%)
skr-13	NP_503042.1	BTB_POZ_SKP1	14..138	CDD:349631	44/125 (35%)
		Skp1	124..169	CDD:460222	18/43 (42%)