Protein Alignment SkpB and skr-13

DIOPT Version :9

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_503042.1
• Gene: skr-13 / 178493
• WormBaseID: WBGene00004819
• Length: 172
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 55/155 - (35%)
• Similarity: 85/155 - (54%)
• Gaps: 6/155 - (3%)

  Fly     3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDN----SVLPLPNVNSLILKKVLHWATYH 63
            :.::.|:|..:....::..:.|:|:...||:||...:|    ..:|:.|||...:.||......|
 Worm    14 VYKIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAELCEKH 78

  Fly    64 KDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            |.| .:.|:..|..| |..|..||..|||::...||:||||:|:|:|:||:...||||:||.|||
 Worm    79 KAD-AIPEDNMNVLK-TLTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGK 141

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRK 153
            :...:|:.|.|..|.....||..:|
 Worm   142 TTAELREIFGINTDEQDAAEETAQK 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	55/155 (35%)
		Skp1	1..110	CDD:214704	36/110 (33%)
		Skp1	84..158	CDD:279768	32/70 (46%)
skr-13	NP_503042.1	Skp1	12..123	CDD:214704	36/110 (33%)
		SKP1	16..166	CDD:227528	54/151 (36%)
		Skp1	97..161	CDD:279768	29/63 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160676
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850