DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and YFL040W

DIOPT Version :10

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_116613.1 Gene:YFL040W / 850503 SGDID:S000001854 Length:540 Species:Saccharomyces cerevisiae


Alignment Length:494 Identity:113/494 - (22%)
Similarity:212/494 - (42%) Gaps:60/494 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVS-MTDRTIT---SFEVTKDAGSWVG 75
            :|...:...:..:::.|.|:      :|||:.....|:|.: :|::|..   .:......|..:|
Yeast    14 MPKIKITKTYEVTKITAILT------LVGFIMGLEVPSLATFLTNKTFNEYFKYPTPLQQGLLMG 72

  Fly    76 GIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIAS 140
            . .||..:.|......:.:...|.....:..:.:.:.:||..|..:::.:|..|.:.|..:|..|
Yeast    73 S-TPLGGIMGCFICCIMNDRFSRIYQFQSGIIIWNIVTLLNFCIWDILGLLICRMIKGMILGNFS 136

  Fly   141 LSLPVYLGETLQPEVRG-TLGLLPTALGNIGILVC-YVAGSFMNW-SMLAF-----LGAALPVPF 197
            :.:..|..|.:....|| |:..:...| .|||||. |:..:...| |..||     :|....:.|
Yeast   137 ILVASYANEVIPRGKRGSTMSYIQLCL-TIGILVMHYLCIALSLWDSHFAFRIAWCIGIIPGLLF 200

  Fly   198 LILMIIIPETPRWFVNRGQEERARK-----ALKWLRGKEADVEPELKELMQSQADADRQATQNTC 257
            .:....:||:..|.|..|:...|::     |.|:...:..|..||:.::   :...|.....|. 
Yeast   201 WMASYALPESYHWLVLHGKMSEAQEIQHNLAKKFNESQPRDAVPEMSKI---ELAGDFWIGVND- 261

  Fly   258 LELFK---RNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGV---VNF 316
            |:..|   |.:.|||.:.:.|....||||||.::.|...|.:..|  ::.|:......:   :|.
Yeast   262 LDFSKKLPRGSFKPLILGMTLQLLVQFSGINIILGYITYICEIVG--LEGNVKLFTSSIPYFINM 324

  Fly   317 FATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHL---------------- 365
            ..:.:.|..||...||::..:....:...|..:|..|.  .:|.|...:                
Yeast   325 VLSLLPITFIDYTSRKLITLLGGFPISGLLITIGALFV--KYGQDTKPIDGNRSLVWSIGENPFV 387

  Fly   366 -GWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVA 429
             ||:...||:|..: |::....|||:...|:||::::....::...|.|...|::  ||....:.
Yeast   388 GGWILTLCFLIVGI-FAMSLSSIPWVYTNEMLPSRVKVKGFAICVTFGWLGNFIL--TFLCPVMI 449

  Fly   430 MGAHG-AFWLFGAICIVGLFFVIIFVPETRGKSLEEIER 467
            ....| .|.:||::..:....|:|:.|||:|.|:|:|::
Yeast   450 ERLKGTTFIIFGSLTFLISLSVLIWFPETKGMSIEDIDK 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 MFS_GLUT6_8_Class3_like 29..464 CDD:340916 110/475 (23%)
YFL040WNP_116613.1 MFS_HXT 28..490 CDD:340914 112/480 (23%)

Return to query results.
Submit another query.