DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and INT2

DIOPT Version :10

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_174313.1 Gene:INT2 / 839902 AraportID:AT1G30220 Length:580 Species:Arabidopsis thaliana


Alignment Length:548 Identity:159/548 - (29%)
Similarity:253/548 - (46%) Gaps:122/548 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLAALAGGIT----GGPL 92
            |.|..:..|:.|:.:...|.||:.:.|    .|: :.|..:|:..::...|:||.|.    ||..
plant    32 AFSAGIGGLLFGYDTGVISGALLYIRD----DFK-SVDRNTWLQEMIVSMAVAGAIVGAAIGGWA 91

  Fly    93 IEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRG 157
            .:.|||||.||.....|::.::::|.|.|..:::.||...|..||:||::.|:|:.|....::||
plant    92 NDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRG 156

  Fly   158 TLGLLPTALGNIGILVCYVAGSFMNWSM-LAF----------LGAALPVPFL---ILMIIIPETP 208
            .|      :...|.|:  ..|.|:::.: |||          ||.| .:|.|   :||..:||:|
plant   157 AL------VSTNGFLI--TGGQFLSYLINLAFTDVTGTWRWMLGIA-GIPALLQFVLMFTLPESP 212

  Fly   209 RWFVNRGQEERARKALKWLRGKEADVEPE---LKELMQSQADADRQATQNTCLELFKRNNL-KPL 269
            ||...:|:||.|:..|:.:...| |||.|   ||:.::::...:..:.:...::|.|...: :.|
plant   213 RWLYRKGREEEAKAILRRIYSAE-DVEQEIRALKDSVETEILEEGSSEKINMIKLCKAKTVRRGL 276

  Fly   270 SISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVV----NFFATFMGIILIDRLG 330
            ...:||..||||.|||.|::|:..|.:.||  ..||.:.:::.:|    |.|.:.:.|..|||:|
plant   277 IAGVGLQVFQQFVGINTVMYYSPTIVQLAG--FASNRTALLLSLVTAGLNAFGSIISIYFIDRIG 339

  Fly   331 RKILLYVSDIAMIVTLSILGGFFY-CKAHGPDVSHL----------------------------- 365
            ||.||.:|...:|::|.||.|.|| ...|.|.:|.|                             
plant   340 RKKLLIISLFGVIISLGILTGVFYEAATHAPAISSLETQRFNNISCPDYKSAMNTNAWDCMTCLK 404

  Fly   366 ------------------------------------------------GWLPLTCFVIYILGFSL 382
                                                            ||..|....:||:.||.
plant   405 ASSPSCGYCSSPIGKEHPGACWISDDSVKDLCHNENRLWYTRGCPSNFGWFALLGLGLYIIFFSP 469

  Fly   383 GFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGL 447
            |.|.:||::..||.|.:.||....:....||....:|.::|..||.|:|....|.:||.|.::.|
plant   470 GMGTVPWIVNSEIYPLRFRGICGGIAATANWISNLIVAQSFLSLTEAIGTSWTFLIFGVISVIAL 534

  Fly   448 FFVIIFVPETRGKSLEEIERKMMGRVPM 475
            .||::.||||:|..:|||| ||:.|..|
plant   535 LFVMVCVPETKGMPMEEIE-KMLERRSM 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 MFS_GLUT6_8_Class3_like 29..464 CDD:340916 151/535 (28%)
INT2NP_174313.1 MFS_HMIT_like 34..543 CDD:340918 146/525 (28%)

Return to query results.
Submit another query.