DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and PMT6

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_195385.1 Gene:PMT6 / 829820 AraportID:AT4G36670 Length:493 Species:Arabidopsis thaliana


Alignment Length:470 Identity:147/470 - (31%)
Similarity:235/470 - (50%) Gaps:49/470 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ALSVSLCSLVVGFVSAYTSPALVSMTDRTITS---FEVTKDAGSWVGGIMPLAALAGGITGGPLI 93
            |:..|:.|::.|:.:...|.|:|.:.:...|:   .||       :.||:.|.||.|.:..|...
plant    21 AIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEV-------LTGILNLCALVGSLLAGRTS 78

  Fly    94 EYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRGT 158
            :.:|||.||:..::.|::.|:|:....|..::|.||...|..||.|.:..|||..|......||.
plant    79 DIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGL 143

  Fly   159 LGLLPTALGNIGILVCYVAGSF-------MNWSMLAFLGAALPVPFLIL---MIIIPETPRWFVN 213
            |..||....:||||:.|:...|       :.|.::  ||.| .||.|:|   ::.:||:|||.:.
plant   144 LASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLM--LGIA-AVPSLVLAFGILKMPESPRWLIM 205

  Fly   214 RGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTC-LE--------LFKRNNLKP- 268
            :|:.:..::.|:.:.....:.|...::: ::.|..|.:...:.. :|        ::|...|:| 
plant   206 QGRLKEGKEILELVSNSPEEAELRFQDI-KAAAGIDPKCVDDVVKMEGKKTHGEGVWKELILRPT 269

  Fly   269 ------LSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSN--LSTIIVGVVNFFATFMGIIL 325
                  |..:||:.|||..|||.||:.|..:|||.||.|....  |.||.||::.....|...:|
plant   270 PAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLL 334

  Fly   326 IDRLGRKILLYVSDIAMIVTLSILG-GFFYCKAHGPDVSHLGW---LPLTCFVIYILGFSLGFGP 386
            :|::||:.||..|...|::.|::|| |....:..|   ..|.|   |.:.....::..||:|.||
plant   335 LDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAG---GKLAWALVLSIVAAYSFVAFFSIGLGP 396

  Fly   387 IPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVI 451
            |.|:...|:.|.|:|...||:..|.|......|:.:|..||.|:...|||::|..:..|...|..
plant   397 ITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFF 461

  Fly   452 IFVPETRGKSLEEIE 466
            ..:|||:||||||||
plant   462 FLLPETKGKSLEEIE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 147/470 (31%)
MFS 33..454 CDD:119392 135/455 (30%)
PMT6NP_195385.1 Sugar_tr 20..479 CDD:278511 147/470 (31%)
MFS 22..463 CDD:119392 135/454 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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