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Protein Alignment Tret1-2 and INT3

DIOPT Version :9

Sequence 1:	NP_610694.1	Gene:	Tret1-2 / 36249	FlyBaseID:	FBgn0033644	Length:	488	Species:	Drosophila melanogaster
Sequence 2:	NP_181117.1	Gene:	INT3 / 818146	AraportID:	AT2G35740	Length:	580	Species:	Arabidopsis thaliana

Alignment Length:	557	Identity:	147/557 - (26%)
Similarity:	239/557 - (42%)	Gaps:	142/557 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 ALSVSLCSLVVGFVSAYTSPALVSMTDRTITSF-EVTKDAGSWVGGIMPLAALAGGIT----GGP 91
            |||..:..|:.|:.:...:.||:.:.:    .| ||  |..:|:..|:....:||.|.    ||.
plant    30 ALSAGIGGLLFGYNTGVIAGALLYIKE----EFGEV--DNKTWLQEIIVSMTVAGAIVGAAIGGW 88

  Fly    92 LIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVR 156
            ..:..|||.::|...|.|::.:|::..|....:|:.||.|.||.||:||::.|:|:.|.....:|
plant    89 YNDKFGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIR 153

  Fly   157 GTLGLLPTALGNIGILVCYVAGSFMNWSM-LAF----------LGAALPVPFLI---LMIIIPET 207
            |.|      :...|:|:  ..|.|:::.: |||          ||.: .:|.:|   ||:.:||:
plant   154 GAL------VSTNGLLI--TGGQFLSYLINLAFVHTPGTWRWMLGVS-AIPAIIQFCLMLTLPES 209

  Fly   208 PRWFVNRGQEERARKALKWLRGKEADVEPELKELMQS----QADAD----------RQATQNTCL 258
            |||.....::..:|..|:.:...|. ||.|:..|.:|    .||.|          |.|..|..:
plant   210 PRWLYRNDRKAESRDILERIYPAEM-VEAEIAALKESVRAETADEDIIGHTFSDKLRGALSNPVV 273

  Fly   259 ELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVV----NFFAT 319
            .       ..|:..:.:...|||.|||.|::|:..|.:.||..  ||.:.:.:.::    |...:
plant   274 R-------HGLAAGITVQVAQQFVGINTVMYYSPTILQFAGYA--SNKTAMALALITSGLNAVGS 329

  Fly   320 FMGIILIDRLGRKILLYVSDIAMIVTLSILGGFF----------------------YCKAHGP-- 360
            .:.::.:||.||:.|:.:|...:|..|.||...|                      .|.|..|
plant   330 VVSMMFVDRYGRRKLMIISMFGIITCLVILAAVFNEASNHAPKIDKRDSRNFAKNATCPAFAPFT 394

  Fly   361 ---------------------------------------DV-----------------SHLGWLP 369
                                                   |:                 |..|:|.
plant   395 ASRSPPSNWNCMKCLQYDCGFCSNGAQEYAPGACIVQSADMKALCHSKGRTFFKDGCPSKFGYLA 459

  Fly   370 LTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHG 434
            :....:||:.::.|.|.:||::..||.|.:.||.|..:....||....||::||..||.|:|:.|
plant   460 IVFLGLYIIVYAPGMGTVPWIVNSEIYPLRYRGLAGGIAAVSNWMSNLVVSETFLTLTNAVGSSG 524

  Fly   435 AFWLFGAICIVGLFFVIIFVPETRGKSLEEIERKMMG 471
            .|.||.....|||||:.:.||||:|...||:|:.:.|
plant   525 TFLLFAGSSAVGLFFIWLLVPETKGLQFEEVEKLLEG 561

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tret1-2	NP_610694.1	MFS_GLUT6_8_Class3_like	29..464	CDD:340916	143/548 (26%)
INT3	NP_181117.1	MFS_HMIT_like	32..546	CDD:340918	137/538 (25%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.