DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and Orct

DIOPT Version :10

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_524479.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster


Alignment Length:473 Identity:108/473 - (22%)
Similarity:196/473 - (41%) Gaps:85/473 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CSLVVGFVSAYTSPALVS---MTDRTITSFEVTKDAGSWVGGIMPLAALAGGITGGPLIEYLGRR 99
            ||..|...|.|.:.|:..   :..|::.|  .|.|:      :..|..|.|.:..|.:.:.|||:
  Fly   102 CSSYVYDRSKYLNSAVTEWNLVCSRSLLS--ATSDS------LFMLGVLLGSLIFGQMSDKLGRK 158

  Fly   100 STILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRGTLGLLPT 164
            .|..|:.|..::..:|.|.|.........|.:.|.......|...|...|.:....|...|:...
  Fly   159 PTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQ 223

  Fly   165 ALGNIGILVCYVAGSFM-NWSMLAFLGAALPVP---FLILMIIIPETPRWFVNRGQEERA----R 221
            ...::|.::......|: :|   .:|..|:.:|   ||....||||:.||.:.:|:::.|    .
  Fly   224 MFFSVGFMLTAGFAYFIHDW---RWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIE 285

  Fly   222 KALKWLRGKEADVEPEL-KELMQSQADADRQ----ATQ--NTCLELFKRNNLKPLSISLGLMFFQ 279
            ||.|   ..:.:|..|: ::|:...|:..:|    |:|  .|..:|.:..||:..::   |:||.
  Fly   286 KAAK---ENKVEVPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTL---LIFFD 344

  Fly   280 QFSGINAVIFYTVQIFKDAGSTIDSN-------LSTIIVGVVNFFATFMGIILIDRLGRKILLYV 337
            .|  :|:.::|        |.:.::|       ::.:|.|.|......:.:..::|.||:.:|  
  Fly   345 WF--VNSGVYY--------GLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSIL-- 397

  Fly   338 SDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIR- 401
            ....|:..:|:|...|.       .|.:.||.:.|.:|..|..:..:|.| ::...|..|..:| 
  Fly   398 CGTMMVAGISLLATIFV-------PSDMNWLIVACAMIGKLAITSSYGTI-YIFSAEQFPTVVRN 454

  Fly   402 -GPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFW------LFGAICI-VGLFFVIIFVPETR 458
             |..||          .:|.:....|...:...|..|      :.||:.: .||..:::  |||.
  Fly   455 VGLGAS----------SMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLL--PETL 507

  Fly   459 GKSLEEI--ERKMMGRVP 474
            .|.:.|.  :.:..|:.|
  Fly   508 NKPMPETIEDGENFGKKP 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 MFS_GLUT6_8_Class3_like 29..464 CDD:340916 105/459 (23%)
OrctNP_524479.1 2A0119 11..514 CDD:273328 105/460 (23%)

Return to query results.
Submit another query.