DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and hmit-1.3

DIOPT Version :10

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:550 Identity:153/550 - (27%)
Similarity:242/550 - (44%) Gaps:122/550 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGS-W---VGGIMPLAALAGGITGGPLIEY 95
            ::..:::.||:..|.: .:||.....:.:....|...| |   :..|.|..|..|.:..||..::
 Worm    31 LAFSAVIGGFLFGYDT-GIVSAAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDF 94

  Fly    96 LGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRG--- 157
            |||:..|:..:|.|.:.:::.|.|...|::|.||.|.|..:|.||:.:|:|:.|.....:||   
 Worm    95 LGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLV 159

  Fly   158 -------TLGLLPTALGN-IGILVCYVAGSFMNWSMLAFLGAALP--VPFLILMIIIPETPRWFV 212
                   |:||:   :.| ||....||....:.|.:: |..||:|  :.| :..:.:||:|||..
 Worm   160 TGFQLMITVGLV---IANIIGGAFSYVDPDQVGWRLM-FAFAAVPAIIQF-VCFLFLPESPRWLY 219

  Fly   213 NRGQEERARKAL-KWLRGKEADVEPELKELMQS-----QADADRQATQNTCLELFKRNNL-KPLS 270
            ..|:...||:.| :...|....|:.|:.|:..|     :|.|:......|.:.:.|..:: |.:.
 Worm   220 EHGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAMI 284

  Fly   271 ISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGV----VNFFATFMGIILIDRLGR 331
            |...|..|||.||||.|::||..|.:.||  :..|.:||.:.|    :||..||:.|.|::|:||
 Worm   285 IGSLLQMFQQLSGINTVMYYTGNIIRSAG--VKDNHTTIWISVGTSAINFLGTFIPIALVERVGR 347

  Fly   332 KILLYVSDIAMIVTLSILGGFF---------------YCKAHGPDVSHLG--------------- 366
            ::||.||.|.:|:.|..:|..|               |...:.|.|.|..               
 Worm   348 RVLLLVSMIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDE 412

  Fly   367 ---------------------------------------------W-----------LPLTCFVI 375
                                                         |           ||:...|.
 Worm   413 NCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVF 477

  Fly   376 YILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFG 440
            |:|.||.|:.|:||::..|..|...|..|.||.||.||....:|:.||..|:.|...:|.|:::.
 Worm   478 YLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYGTFFIYC 542

  Fly   441 AICIVGLFFVIIFVPETRGKSLEEIERKMM 470
            ...:|.|.||..|||||:|.|::|:|...|
 Worm   543 GCTMVALVFVFFFVPETKGYSIDEVEMLFM 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 MFS_GLUT6_8_Class3_like 29..464 CDD:340916 150/542 (28%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:475125 145/531 (27%)
MFS <190..>249 CDD:475125 18/60 (30%)

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