DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and nfatc3

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001135546.1 Gene:nfatc3 / 100216091 XenbaseID:XB-GENE-493918 Length:894 Species:Xenopus tropicalis


Alignment Length:91 Identity:19/91 - (20%)
Similarity:34/91 - (37%) Gaps:19/91 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 EADVEPELKELMQSQADADRQA----TQNTCLELFKRNNLKPLSISLGLMFFQQFSG------IN 285
            :.||:|:.......:.:..|.|    |.|..:........|||::       |.|.|      :.
 Frog   420 KVDVQPKTHHRAHYETEGSRGAVKAVTGNHPIVKLTGYTEKPLNL-------QMFIGTADDRYVR 477

  Fly   286 AVIFYTVQIFKDAGSTIDSNLSTIIV 311
            ...||  |:.:..|.|:.:....|::
 Frog   478 PHAFY--QVHRITGKTVATASQEIVI 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 19/91 (21%)
MFS 33..454 CDD:119392 19/91 (21%)
nfatc3NP_001135546.1 RHD-n_NFAT 407..580 CDD:143641 19/91 (21%)
IPT_NFAT 585..685 CDD:238583
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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