DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and fadE

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_414756.2 Gene:fadE / 949007 ECOCYCID:G6105 Length:814 Species:Escherichia coli


Alignment Length:618 Identity:129/618 - (20%)
Similarity:220/618 - (35%) Gaps:138/618 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RG-RSTKATSSSLDSQHQDAATT--EGGRAESVEESPEQQRKLPTREPLAKNFFIGVVD-KELLA 84
            || |......|..:.:..||.||  ||                        :.|.|..| |:|..
E. coli    74 RGFRKVMPPMSRTEKEAIDAGTTWWEG------------------------DLFQGKPDWKKLHN 114

  Fly    85 YPEVIPR---DEMAQLENSL---LPLKNYFVEPRETEETSPET---LRQLGLYGLNVSTDYEG-- 138
            ||:  ||   :|.|.|:..:   ..:.|.|....|..:..||.   |::...:.:.:..:|.|  
E. coli   115 YPQ--PRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLE 177

  Fly   139 -KGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYE 202
             ..|..|..|......|..:.:|:|:.......:||:..||..|:..||..||.|:.|   ..:.
E. coli   178 FSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEI---PCFA 239

  Fly   203 ISPPEEDYFNTTAELFPE-----YGKWQ--------LNGEKSFVICTPGERQLFLVLAQTQQPN- 253
            ::.||.   .:.|...|:     .|:||        |...|.::...|....|.|.. :...|. 
E. coli   240 LTSPEA---GSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAF-KLSDPEK 300

  Fly   254 -VPGVLGRGTTIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFE-GVKLGE------DQVVGLPH 310
             :.|....|.|..|:.:...||.:|.:|...        .|.|: |...|:      |.::|.|.
E. coli   301 LLGGAEDLGITCALIPTTTPGVEIGRRHFPL--------NVPFQNGPTRGKDVFVPIDYIIGGPK 357

  Fly   311 DGNRYSEQLVR----------SSRLRGSLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIH 365
            ...:....||.          .|...|.:..::||      ...|.....|..:.:..:|.....
E. coli   358 MAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA------TGAYAHIRRQFKISIGKMEGIEEP 416

  Fly   366 MSRAMCSVYAMESMLYL-TAGLLDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSG 429
            ::|...:.|.|::...| |.|::   ..:...:.|||.||....:........:.:.|.|.::.|
E. coli   417 LARIAGNAYVMDAAASLITYGIM---LGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLG 478

  Fly   430 ETTELGLRDAAQ-----LCTQGESLDTLGMFIALTG--------LQHAGQAMNTGVRKSRNPLF- 480
            ::..|.  .|.|     :..:|.::.|..|.|...|        |:....|.|..|......|| 
E. coli   479 QSNFLA--RAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFK 541

  Fly   481 NPGHI-----------FGKFLDNNSIDNPKTKMQLSEHVHPSLEAAAQCIELSVARLQMAVELMF 534
            :.||:           ..:.|.:::.....|| :..:|::......|...::|:|.|        
E. coli   542 HIGHVGSNKVRSFWLGLTRGLTSSTPTGDATK-RYYQHLNRLSANLALLSDVSMAVL-------- 597

  Fly   535 TKHGNAVVERQSEMQRLAEVGTLIYAMWASVAR 567
               |.::..|:....||.::.:.:|...|.:.|
E. coli   598 ---GGSLKRRERISARLGDILSQLYLASAVLKR 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 85/411 (21%)
fadENP_414756.2 FadE_coli 3..814 CDD:439499 129/618 (21%)

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