DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and Acoxl

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001402606.1 Gene:Acoxl / 296138 RGDID:1306814 Length:656 Species:Rattus norvegicus


Alignment Length:348 Identity:68/348 - (19%)
Similarity:112/348 - (32%) Gaps:126/348 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 PLQQQRYLQDLATGKL-------------IGTEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEK 230
            ||::|:|     ||..             |.|||.::....|                       
  Rat   130 PLKEQKY-----TGMFAMTEKGHGSNIRGIQTEATFDCDSQE----------------------- 166

  Fly   231 SFVICTPGERQLFLVLAQTQQPNVPGVL--------GRGTTIFLVDSQQE------GVRLGEKHA 281
             |||..|.|....:.:......|...|.        .:|...|:|..:.|      ||...:...
  Rat   167 -FVIDMPCENAQKMYIGNAMHGNYAAVFAQLIIEGKSQGPHCFIVPIRDENGNLYPGVTAIDMMY 230

  Fly   282 TFGCRKAEIRRVHFEGVKLGE----DQVVGLPHDGNRYSEQLVRSSRLRGSL------------- 329
            ..|....:...:.|:.|::..    |::..:..||..:|....:|:|....|             
  Rat   231 KEGLNGVDNGILIFDKVRIPRENMLDKLGSVTPDGQYHSPIQSKSARFNAMLAILTPSRLAVTFQ 295

  Fly   330 ------VGLSLAKKLLNELAQYTVNTTQCGV-----------QLQDLELTRIHMSRAMCSVYAME 377
                  :||.:|       .:|:.:..|.|.           |:|.|.|.. |::.|:...:...
  Rat   296 AMGAMKLGLMIA-------IRYSHSRRQFGPKGKEEVKIIEHQMQALRLMS-HLATALALTFTSR 352

  Fly   378 SMLYLTAG-LLDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQ 441
            .     || :|||...|...|       ...|.:.|:      :.|.|:..:.||... |:|..:
  Rat   353 H-----AGHILDEDILQGREL-------INRRSLQAL------MAGLKAYSTWETVRC-LQDCRE 398

  Fly   442 LCTQGESLDTLGMFI--ALTGLQ 462
             ||.|     :|..:  .|:||:
  Rat   399 -CTGG-----MGYMMENRLSGLK 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 65/341 (19%)
AcoxlNP_001402606.1 ACAD 26..625 CDD:447864 68/348 (20%)

Return to query results.
Submit another query.