DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-3

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_500943.1 Gene:acox-3 / 177386 WormBaseID:WBGene00019060 Length:667 Species:Caenorhabditis elegans


Alignment Length:412 Identity:83/412 - (20%)
Similarity:145/412 - (35%) Gaps:129/412 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LTYSRNGKLLTRGRSTKATSSSLDSQHQDA----ATTEGGRAE-SVEESPEQQRKL-PTREPLAK 71
            |:..|.| ::.:|......:|::..::..|    ...:|...| .|.|.|.||.:| |.   |:.
 Worm   284 LSVGRLG-IIAKGMMACTFASTIAIRYSVARRQFGPVKGAENEIPVLEYPLQQYRLFPY---LSA 344

  Fly    72 NFFIGVVDKELLA-YPEVIPR-------DEMAQLENSLLPLKNYFVEPRET---EETSPETLRQL 125
            ...|.:..|:.:. :.|.:.|       ||:::....:..|.: ..:|..|   .|:..|..:..
 Worm   345 AICIRIFQKKFVGHFTEYMMRVIMGEKSDELSEFSKEVHALSS-GAKPVATWLGVESLGEARKAC 408

  Fly   126 GLYG------LNVSTD-------YEGKGYGWSASLMASEPDSTDINVTLG-------LQTHRVVV 170
            |.:|      ||...|       :||:.:      |..:..|   |:.||       ::|....:
 Worm   409 GGHGYLQMSRLNTLRDDNDPSQTFEGENF------MILQQTS---NILLGKAQSIGSIETPMSTM 464

  Fly   171 DLLKE------------VGTPLQQQRYLQDLATGKLIGTEAIYEISPPEEDYFNTTAELFPEYGK 223
            ..|.:            |...|...|||    |..|:.|               |:||.:    :
 Worm   465 SFLNQKPSKFSSWSSNPVNDVLSAYRYL----TYHLLQT---------------TSAEAY----R 506

  Fly   224 WQLNGEKSFVICTPGE--RQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVR----------- 275
            .:.:|:.||.:....:  |.:.|.:|.|:...:..|     ..||.:.:.:.|:           
 Worm   507 LKASGKNSFEVRNEIQIHRAVNLSVAYTEHTMIHWV-----QQFLKEIEDQSVKPVLQKVLNLFS 566

  Fly   276 --LGEKH-ATF---GCRKAEIRRVHFEGVKLGED-------QVVGLPHDGNRYSEQLVRSSRLRG 327
              |.|:| ||.   |         :..|.|.|||       .|..|..:.....:.:.....:..
 Worm   567 LFLLERHLATLYITG---------YASGGKFGEDLREKLRLAVAELKPEAIALVDSIAPDDFILH 622

  Fly   328 SLVGLSLAK---KLLNELAQYT 346
            |.:|.|..|   .::.|..:||
 Worm   623 SALGASDGKAYEHIMEEFRKYT 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 63/319 (20%)
acox-3NP_500943.1 AXO 4..642 CDD:173839 81/408 (20%)

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