DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and acox-1.4

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_493264.1 Gene:acox-1.4 / 173164 WormBaseID:WBGene00008567 Length:662 Species:Caenorhabditis elegans


Alignment Length:554 Identity:114/554 - (20%)
Similarity:197/554 - (35%) Gaps:158/554 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 ETEETSP-----------ETLRQLGLYGLNVS--TDYEGKG-----YGWSASLMASEPDSTDINV 159
            |..:|.|           |..|:|.:...|:.  .||:..|     | ...:.|...|       
 Worm    55 ELADTQPFPFMDRLEKITEGSRKLEVLNNNIRDIIDYDDNGERLHIY-QEVTGMEGHP------- 111

  Fly   160 TLGLQTHRVV-VDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYEISPPEE-DYFNTTAELFPEYG 222
               |..|.|: :..|....:..||:::|......::||..|..|:..... ....|||..||:  
 Worm   112 ---LALHEVMFIPALVSQASKEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLETTATYFPD-- 171

  Fly   223 KWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLGR------------------GTTIFLVDS 269
                  .:.||:.||         ..|.....||.||:                  |...|:|..
 Worm   172 ------TQEFVLNTP---------TTTALKWWPGALGKSSNYAVVVVDMIIKGKSYGPHPFMVQL 221

  Fly   270 QQE-------GVRLGE----------KHATFGCRKAEIRRVH--FEGVKLGED-QVVGLPHDGNR 314
            :.|       |:.:|:          .:...|..|..:.|.:  ...|::..| ..|..||....
 Worm   222 RDEKTHIPLKGIVVGDIGPKMSFNGGDNGFLGFDKFRVPRTNLLMRHVRVEADGTYVKPPHAKVN 286

  Fly   315 YSEQL-VRSSRLRGSLVGLSLAKKLLNELAQYTV-------NTTQCGVQLQDLELTRIH-----M 366
            :|..: |||....|.  |..||:.|:..:....|       |.|| .|::.|.: |:.|     :
 Worm   287 HSAMVHVRSHMATGQ--GALLAQALIIAVRYSAVRRQGFLENKTQ-EVKVLDYQ-TQQHRLFPSL 347

  Fly   367 SRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGET 431
            :||...::.....::|.:.||     :||.:.:.    ..:..::|:.|      |.||:::.:|
 Worm   348 ARAYAFIFTGFETIHLYSQLL-----KDVDMGNT----SGMADLHALTS------GLKSVVTHQT 397

  Fly   432 TELGLRDAAQLC-TQGESL-----DTLGMFIALTGLQHAGQAM-----------------NTGVR 473
            .| |:..|...| ..|.|:     :..|  ||:.|..:.|:.|                 .:|..
 Worm   398 GE-GIEQARMACGGHGYSMASYISEIYG--IAIGGCTYEGENMVMLLQLARYLVKSVELIKSGEA 459

  Fly   474 KSRNPLFNPGHIFGKFLDNNSIDNPKTKMQLSEHVHPSLEAAAQCIELSVARLQMAVELMFTKHG 538
            |...|:.:.....|...|.:|::...|..:     |.:...|.:..|       ..::||.:...
 Worm   460 KKLGPMVSYLAAKGGHPDLSSLNGYVTAFE-----HMARRQAWKATE-------KFLKLMESGES 512

  Fly   539 NAVVERQS--EMQRLAEVGTLIYAMWASVARASR 570
            ..:...:|  |:.|.:.:.|.::.:.|.:.|.||
 Worm   513 REIAWNKSTVELTRASRLHTRLFIIEAFMRRVSR 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 89/420 (21%)
acox-1.4NP_493264.1 ACAD 13..636 CDD:447864 114/554 (21%)

Return to query results.
Submit another query.