DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-1.2

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_493262.2 Gene:acox-1.2 / 173163 WormBaseID:WBGene00008565 Length:661 Species:Caenorhabditis elegans


Alignment Length:668 Identity:124/668 - (18%)
Similarity:223/668 - (33%) Gaps:230/668 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ASRLLTYSRNGKLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAKNF 73
            |:|.:....|.:||...|.....:..:      ||...|.     ||...::|::          
 Worm     2 ANRSIRDGDNPELLEERRMATFDTDKM------AAVIYGS-----EEFARRRREI---------- 45

  Fly    74 FIGVVDK-----ELLAYPEVIPRDEMAQLENSLLPLKNYFVE--PRETEETSPETLRQLGLYGLN 131
             ...|.|     ::..||.:...:::.:....:..|..|..:  .|:.||.|....|::      
 Worm    46 -TDAVSKIPELADIKPYPFLTREEKVTEGTRKISILTKYLNQLIDRDNEEESLHLHREV------ 103

  Fly   132 VSTDYEGKGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIG 196
              ..|||..:....:|.                     :..|:...:..||:::|:.....::||
 Worm   104 --IGYEGHPFALHDALF---------------------IPTLQSQASDEQQEKWLERARRREIIG 145

  Fly   197 -----------------TEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFL 244
                             |.|:|:|:..|                        ||:.||       
 Worm   146 CYAQTELGHGSNLRNLETTAVYDIASQE------------------------FVLHTP------- 179

  Fly   245 VLAQTQQPNVPGVLGR------------------GTTIFLVDSQQE-------GVRLGE------ 278
              ..|.....||.||:                  |...|:|..:.|       ||.:|:      
 Worm   180 --TTTALKWWPGALGKSCNYALVVAELIIKRNNYGPHFFMVQLRDEKTHIPLKGVTVGDIGPKMN 242

  Fly   279 ----KHATFGCRKAEIRRVH--FEGVKLGED-QVVGLPHDGNRYSEQLVRSSRLRGSLV---GLS 333
                .:...|.....:.|.:  ....|:..| ..|..||....||..:    ::|..:.   ||.
 Worm   243 FNAADNGYLGLNNLRVPRTNLLMRHCKVEADGTYVKPPHAKIGYSGMV----KIRSQMAMEQGLF 303

  Fly   334 LAKKLLNELAQYT-------VNTTQCGVQLQDLELTRIH-----MSRAMCSVYAMESMLYLTAGL 386
            || ..|...|:|:       ::..|..|::.|.: |:.|     ::||...::.....::|.:.|
 Worm   304 LA-HALTIAARYSAVRRQGHLDDKQVEVKVLDYQ-TQQHRLFPSLARAYAFIFTGFETIHLYSQL 366

  Fly   387 LDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLC-TQGESLD 450
            |     :||.:.:.    ..:..::|:.|      |.||:::.||.| |:..|...| ..|.|:.
 Worm   367 L-----KDVDMGNT----SGMADLHALTS------GLKSVVAHETGE-GIEQARMACGGHGYSMA 415

  Fly   451 ---TLGMFIALTGLQHAGQAM-----------------NTGVRKSRNPLFNPGHIFGKFLDNNSI 495
               ::...||:.|..:.|:.|                 ..|..|...|:       ..:|.:.|.
 Worm   416 SYISVVYGIAIGGCTYEGENMVMLLQLARYLVKSVELIKAGKAKKLGPV-------ASYLADKSD 473

  Fly   496 DNPKTKMQLSEHVHPSLEAAAQCIELSVARLQ------MAVELMFTKHGNAVVERQS--EMQRLA 552
            :...|          ||....:..| ::||.|      ..::||.:.....|...:|  |:.|.:
 Worm   474 ETDLT----------SLNGYVKMFE-NMARRQAWKATEKFLKLMESGESREVAWNKSAVELTRAS 527

  Fly   553 EVGTLIYAMWASVARASR 570
            .:.|.::.:.|.:.|.||
 Worm   528 RLHTRLFIIEAFMRRVSR 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 80/440 (18%)
acox-1.2NP_493262.2 ACAD 12..635 CDD:447864 121/658 (18%)

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