DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and acdh-5

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_491942.1 Gene:acdh-5 / 172400 WormBaseID:WBGene00016491 Length:442 Species:Caenorhabditis elegans


Alignment Length:454 Identity:95/454 - (20%)
Similarity:183/454 - (40%) Gaps:47/454 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LLTRGRSTKATSSSLDSQHQDAATTEGGRAESV-----EESPEQQRKLPTREPLAKNFFIGVVDK 80
            |||:.::..|..::.::.::..::..|.:..||     ..||:.::      |:|         :
 Worm     5 LLTKLKNNAALGAAANNLNKFRSSNLGNQRRSVSVAVTSTSPKSEK------PVA---------R 54

  Fly    81 ELLAYPE---VIPRDEMAQLENSLLP-LKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEGKGY 141
            |.:.|.|   |:.:.....:|..:.| :..:..:.|.......:.|...|::|:|....:.|.|.
 Worm    55 EHMIYDETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGT 119

  Fly   142 GWSASLMASEP----DSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYE 202
            ..:.:...:|.    :...|.:::.:||. :....|.:.|:...::|:|:...||.|:.:.|:  
 Worm   120 DIAMATAIAEQMGAINCGSIPMSVMVQTD-MSTPALAQFGSDALRERFLRPSITGDLVSSLAV-- 181

  Fly   203 ISPPEEDYFNTTAELFPEYGKWQ-----LNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLGRGT 262
                .|.:..:.......:.:.|     :||.|.: |...|:.....||..|.  |...| .:..
 Worm   182 ----SEPHAGSDVSAVHTHARRQGSDLIINGSKMW-ITNGGQADWACVLVNTS--NTSNV-HKNK 238

  Fly   263 TIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRG 327
            ::..|.....||.........|.|.::..::.||.|::....::|....|..|..:.....||..
 Worm   239 SLVCVPLDAVGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFGYQMKQFNDERLVT 303

  Fly   328 SLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRA 392
            ..|||...:|.::|..:|..:....|..|.|.:..:..::.....:.|..::||.|  :|...|.
 Worm   304 VAVGLLPLQKCIDETIEYARDRLLFGKTLLDQQYIQFQLAELEAELEATRALLYRT--VLARSRG 366

  Fly   393 QDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFI 456
            .||::.:|:.|....|...||..|.|.|.|....|:........|| .:|.:.|...|.:.|.|
 Worm   367 DDVSMLTAMAKLKIGRLARAITDQCLQVWGGAGYLNENGISRAFRD-FRLFSIGAGCDEVMMRI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 80/375 (21%)
acdh-5NP_491942.1 CaiA 66..442 CDD:441563 80/378 (21%)

Return to query results.
Submit another query.