DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and Arc42

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_321112.6 Gene:Arc42 / 1281174 VectorBaseID:AGAMI1_013418 Length:404 Species:Anopheles gambiae


Alignment Length:359 Identity:84/359 - (23%)
Similarity:148/359 - (41%) Gaps:40/359 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 ENSLLPLKNYFVEPRETEETSP-ETLR---QLGLYGLNVSTDYEGKGYGWSASLMASEPDSTDIN 158
            :|.|:|....|    :.|...| |.:|   :|||..::|..:|.|.|..:.|..:|.|      .
Mosquito    42 DNELVPNAARF----DREHLYPAEQIRKMGELGLMAISVKEEYGGTGLDYVAYAIAME------E 96

  Fly   159 VTLGLQTHRVVVDL--------LKEVGTPLQQQRYLQDLATGKLIGTEAIYEISPP----EEDYF 211
            ::.|..:..|::.:        |...|...|||:|:.:...|..:|   .:.:|.|    :....
Mosquito    97 ISRGCASAGVIMSVNNSLYLGPLTHFGNEQQQQKYVAEYTDGSRVG---CFALSEPGNGSDAGAA 158

  Fly   212 NTTAELFPEYGKWQLNGEKSFVICTPG-ERQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVR 275
            :|||.|..::  |.|||.|.::  |.| |....:|.|.|.:    .:..:|.:.|:|..:..|..
Mosquito   159 STTATLKGDH--WVLNGTKCWI--TNGYEAGAAVVFATTDK----SLKHKGISAFIVPKETPGFS 215

  Fly   276 LGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLN 340
            ||:|....|.|.:....:.||...:..:.::|.|..|.:.:.|.:.:.|:..:...|.:|:..|.
Mosquito   216 LGKKEDKLGIRGSSTCSLIFEDCAIPRENLLGEPGFGFKIAMQTLDAGRIGIASQALGIAQASLE 280

  Fly   341 ELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESAITKYF 405
            ....|.......|..:..|:..:..::.....:.|...:.:..|.|.|  ..:..|.|:|..|..
Mosquito   281 CAVDYANKRIAFGKPIAKLQAIQTKIADMATRLEAARLLTWRAAWLKD--NKKPFTKEAAQAKLA 343

  Fly   406 TLRQVYAIASQNLGVVGPKSLLSGETTELGLRDA 439
            ........|.|::.|:|....:|....|...|||
Mosquito   344 ASEAATYCAHQSIQVLGGMGYVSDMPAERHYRDA 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 84/359 (23%)
Arc42XP_321112.6 None

Return to query results.
Submit another query.