DRSC/TRiP Functional Genomics Resources

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Protein Alignment en and Nanog

DIOPT Version :10

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_082292.1 Gene:Nanog / 71950 MGIID:1919200 Length:305 Species:Mus musculus


Alignment Length:196 Identity:56/196 - (28%)
Similarity:81/196 - (41%) Gaps:61/196 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 SLASPPPASNASTISSTSSV-------ATSSSSSSSGCSSAASSLNSSPSSR-LGASGSGVNASS 381
            ||.|...|||:...||..:|       ....|::...|:.|||   ..|||. |...||..:::|
Mouse    10 SLPSSEEASNSGNASSMPAVFHPENYSCLQGSATEMLCTEAAS---PRPSSEDLPLQGSPDSSTS 71

  Fly   382 PQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQ 446
            |: |.:..|.|   |.|                                             |::
Mouse    72 PK-QKLSSPEA---DKG---------------------------------------------PEE 87

  Fly   447 PKDKTNDEK-RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIK 510
            .::|....| :.||.||..||..||..|.:.:||:.::.|:|||.|.|:..|:|.||||:|.|.|
Mouse    88 EENKVLARKQKMRTVFSQAQLCALKDRFQKQKYLSLQQMQELSSILNLSYKQVKTWFQNQRMKCK 152

  Fly   511 K 511
            :
Mouse   153 R 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeodomain 455..511 CDD:459649 26/56 (46%)
Engrail_1_C_sig 512..542 CDD:431338 56/196 (29%)
NanogNP_082292.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..95 19/100 (19%)
Sufficient for interaction with SALL4. /evidence=ECO:0000269|PubMed:16840789 96..155 27/58 (47%)
Homeodomain 98..153 CDD:459649 25/54 (46%)
Required for DNA-binding. /evidence=ECO:0000250|UniProtKB:Q9H9S0 123..152 14/28 (50%)
PTZ00395 <190..>250 CDD:185594
10 X repeats starting with a Trp in each unit 198..247
Sufficient for transactivation activity 198..247
Sufficient for strong transactivation activity 248..305
Blue background indicates that the domain is not in the aligned region.

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