DRSC/TRiP Functional Genomics Resources

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Protein Alignment en and scro

DIOPT Version :10

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster


Alignment Length:459 Identity:89/459 - (19%)
Similarity:148/459 - (32%) Gaps:161/459 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 RVKSLQREYAD--------RNPIYLNAGDNFQGTLWYSLLRWNVTAHFLNLLPADVMTLGNHEFE 144
            |:.||.|...|        |||.  ....|.:....||||.:::           ::|       
  Fly    11 RLASLLRRENDPSAAMKLFRNPD--PESTNPKRPFRYSLLCYDI-----------IIT------- 55

  Fly   145 HGIGGLVPFLDVIDSPVVVTNIDDREEPTLQGKYTKSVVLERGGRKIGVVGVIHHLTNTMGMTER 209
             .:||...| |.:|..::....|.|..||                :|....||:........:..
  Fly    56 -KLGGSKMF-DELDQVLLHLKTDTRIVPT----------------EIIFCNVINFFGRGKLPSRA 102

  Fly   210 LRFLDEVEQLRMEIGRLKEEGVQHIVVLSHCGLEIDRIIARELPDVDVVVGGHSHTF---LYNGT 271
            |...||:.|.|.:  |..:.....:..|..|| |::::..| |..:|......:.|:   ::..:
  Fly   103 LHMFDEMPQYRCQ--RTVKSLNSLLSALLKCG-ELEKMKER-LSSIDEFGKPDACTYNILIHGCS 163

  Fly   272 ADGFPDDPEDTYPIVVE---HPEGRT--TLI--------VQAASYAKY----------------- 306
            ..|..||....:..:|:   .|.|.|  |||        |:.|...|:                 
  Fly   164 QSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228

  Fly   307 -------VGRITLYF---DE--EGNIREWEGNPEFLDSSVPQDEEVLAQLAPWREQVNVQANRQI 359
                   :|.::..|   ||  ||.|:        :|:::  ...:::.|        ::|.|..
  Fly   229 LIKALCQIGELSFAFKLKDEAYEGKIK--------VDAAI--YSTLISSL--------IKAGRSN 275

  Fly   360 GYSAVML------AKPD-----------CARGECNFGNFITDGYIDYFATEGQKAPKPD------ 401
            ..|.::.      .|||           |...:....|.:.|..:       :|..|||      
  Fly   276 EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV-------EKGLKPDVISYNM 333

  Fly   402 ---------QWTEVAIAFN--TGGGMRTSLFAGNLTFDDLVTAVPFEDT---IDSFDLLG----R 448
                     :|.|....|.  ...|......:..:.||.|...:.||:.   :|.....|    |
  Fly   334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRR 398

  Fly   449 DLLD 452
            |.|:
  Fly   399 DRLE 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeodomain 455..511 CDD:459649
Engrail_1_C_sig 512..542 CDD:431338
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 10/73 (14%)
Blue background indicates that the domain is not in the aligned region.

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