DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and Hhex

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_077361.1 Gene:Hhex / 79237 RGDID:619932 Length:271 Species:Rattus norvegicus


Alignment Length:238 Identity:58/238 - (24%)
Similarity:81/238 - (34%) Gaps:83/238 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 PLKAPKKSGKPLN---------LAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNT-SG 382
            ||.||....:|.:         |.:..||...:.:..|        .|.|.::..||..|.. ..
  Rat    17 PLYAPTPLLQPAHPTPFYIDDILGRGPAAPTPTPTLPS--------PNSSFTSLVSSYRTPVYEP 73

  Fly   383 APVDLVKSPPPAAG-AGATGASGKSG-------------------EDSGTPIVWPAWVYCTRYSD 427
            .||....|..|||. |.|.|..|..|                   :..|.|::|           
  Rat    74 TPVHPAFSHHPAAALAAAYGPGGFGGPLYPFPRTVNDYTHALLRHDPLGKPLLW----------- 127

  Fly   428 RPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNE 492
            .|...|....||              ||.|.                   ||..|...|:.:|..
  Rat   128 NPFLQRPLHKRK--------------GGQVR-------------------FSNDQTIELEKKFET 159

  Fly   493 NRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNP 535
            .:||:...|::|:..|.|:|.|:|.||||:|||.::.. .:||
  Rat   160 QKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLK-QENP 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 21/55 (38%)
Engrail_1_C_sig 529..554 CDD:431338 2/7 (29%)
HhexNP_077361.1 Homeodomain 137..195 CDD:459649 26/90 (29%)

Return to query results.
Submit another query.