DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and Barhl2

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_075245.1 Gene:Barhl2 / 65050 RGDID:620726 Length:384 Species:Rattus norvegicus


Alignment Length:367 Identity:82/367 - (22%)
Similarity:126/367 - (34%) Gaps:123/367 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 LGLGPGGAV-------HPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSR 292
            :|..|...:       .||    |..|...||||:.:                         |.:
  Rat    59 VGTAPSSPISVTLEPPEPH----LVTDGPQHHHHLHH-------------------------GQQ 94

  Fly   293 LPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSS 357
            .|...|                ....|...:..:.|...|:.:.:.|.   |.|||..:.:.|..
  Rat    95 PPPPSA----------------PPAQSLQPSPQQQPPPQPQSAAQQLG---SAAAAPRTSTSSFL 140

  Fly   358 LANICSNSNDSNSTATSSSTTNTSGAPVDLVKSP--PPAAGAGATGASGK---SGEDSGTPI--- 414
            :.:|..:|....:.|..|::          |.||  .|.....|...|.:   ..|||.|.:   
  Rat   141 IKDILGDSKPLAACAPYSTS----------VSSPHHTPKQECNAAHESFRPKLEQEDSKTKLDKR 195

  Fly   415 -VWPAWVYC---TRYSDR--PSSGRSP--RARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPED 471
             ...:.:.|   ....||  .||..||  ||:||:|                             
  Rat   196 EDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRK----------------------------- 231

  Fly   472 KRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPL 536
              .|||||..||.:|:..|...:||:.:.|..|:..|.|.:.|:|.|:||:|.|.|:.:.    :
  Rat   232 --ARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTA----V 290

  Fly   537 ALQLMAQGLYNHSTI------PLTREEEELQELQEAASAAAA 572
            .|:|:|:. .|:|.:      |.......|..:....:||||
  Rat   291 GLELLAEA-GNYSALQRMFPSPYFYHPSLLGSMDSTTAAAAA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 22/55 (40%)
Engrail_1_C_sig 529..554 CDD:431338 6/30 (20%)
Barhl2NP_075245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 21/122 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..237 27/123 (22%)
Homeodomain 230..286 CDD:459649 23/86 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..384
Blue background indicates that the domain is not in the aligned region.

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