Protein Alignment inv and hoxa13a

DIOPT Version :10

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_001078963.1
• Gene: hoxa13a / 570239
• ZFINID: ZDB-GENE-990415-5
• Length: 310
• Species: Danio rerio
• Alignment Length: 296
• Identity: 67/296 - (22%)
• Similarity: 104/296 - (35%)
• Gaps: 94/296 - (31%)

  Fly   310 GSSTGSSKN-SGNTNGNRSPLKAPKKSGKPLNLA-----QSNAAANSSLSFSSSLANICSNSNDS 368
            |....:||| .|.|.||.||.........|.:||     .|:..|.::...|....:.||....|
Zfish    23 GGLDDTSKNMEGFTGGNFSPSPCRNLMSHPASLAPSATYPSSEVAAAAAGDSGKQCSPCSAVQGS 87

  Fly   369 NSTATS-------------SSTTNTSGAPVDLVKSPPPAA---GAGATGASGKSGED-------- 409
            .|.:.|             .|..:.||..|......|.:.   |......|..:|||
Zfish    88 ASASISYGYFGGGGYYPCRMSHHHGSGGGVKTCAQSPASGSPYGEKYMDTSASTGEDYTSSRAKE 152

  Fly   410 ------------------SGTPIV-----------------------------WPAWVYCTRYSD 427
                              ...|:|                             |...||||:  :
Zfish   153 FALYSSYASSPYQPVPSYLDVPVVQAISGPSEPRHESLLPMESYQPWAITTSGWNGQVYCTK--E 215

  Fly   428 RPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNE 492
            :..:|...::..|:      |.:.||         |||......::.|..::..||..|:.|:..
Zfish   216 QQQTGNVWKSSIPE------SVSHGG---------ADGSSFRRGRKKRVPYTKVQLKELEREYAT 265

  Fly   493 NRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK 528
            |:::|:.:|:::|.:..|:|.|:.|||||:|.|.||
Zfish   266 NKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKK 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	19/55 (35%)
		Engrail_1_C_sig	529..554	CDD:431338	67/296 (23%)
hoxa13a	NP_001078963.1	HoxA13_N	29..148	CDD:463521	30/118 (25%)
		Homeodomain	245..301	CDD:459649	19/55 (35%)