DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and Dlx6

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:457 Identity:89/457 - (19%)
Similarity:121/457 - (26%) Gaps:230/457 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SENSVLSVGQEQSEAAQAALSAQAQARQRLLISQIYRPSAFSSTATTVLPPSEGPPFSPEDLLQL 161
            |:::.:..||:|.:..|.....|.|.:|     |..:|.          ||...||..|......
  Rat    17 SKSAFMEFGQQQQQQQQQQQQQQQQQQQ-----QQQQPP----------PPPPPPPPQPHSQQTS 66

  Fly   162 PPSTGTFQEEFLRKSQLYAEELMKQQMHLMAAARVNALTAAAAGKQLQMAMAAAAVATVPSGQDA 226
            |...|.                 ...:|.:.:|   |..|||||.                    
  Rat    67 PAMAGA-----------------HYPLHCLHSA---AAAAAAAGS-------------------- 91

  Fly   227 LAQLTATALGLGPGGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGS 291
                                          |||||..:|       |                  
  Rat    92 ------------------------------HHHHHQHHH-------H------------------ 101

  Fly   292 RLPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSS 356
                        |....||        .||:..:||                  .||...:|.|.
  Rat   102 ------------GSPYASG--------GGNSYNHRS------------------LAAYPYMSHSQ 128

  Fly   357 SLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVY 421
            ....:.|..|       ||:...|.|...|..|:..                             
  Rat   129 HSPYLQSYHN-------SSAAAQTRGDDTDQQKTTV----------------------------- 157

  Fly   422 CTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARL 486
                                               :|.||....|...:.::|||.:|..||..|
  Rat   158 -----------------------------------IENGEIRFNGKGKKIRKPRTIYSSLQLQAL 187

  Fly   487 KHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTI 551
            .|.|.:.:||....|.:|:..|||.:.|:||||||||:|.||           |:.||...|.:.
  Rat   188 NHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK-----------LLKQGSNPHESD 241

  Fly   552 PL 553
            ||
  Rat   242 PL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 26/55 (47%)
Engrail_1_C_sig 529..554 CDD:431338 6/25 (24%)
Dlx6NP_001414318.1 None

Return to query results.
Submit another query.