DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and emx1

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_937787.1 Gene:emx1 / 378964 ZFINID:ZDB-GENE-031007-7 Length:231 Species:Danio rerio


Alignment Length:202 Identity:57/202 - (28%)
Similarity:79/202 - (39%) Gaps:50/202 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 KPLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATG 401
            :|..|:.| |.|:|.|:...|.|   ..:...|.....|.|.|  .||:.:   .|...|:....
Zfish    29 RPTALSYS-APADSFLNGYQSPA---GRALYPNPELVFSETVN--HAPLSM---HPHQLGSAPLQ 84

  Fly   402 ASGKSGEDSGTPIVWPAWVYCTRYSDRPSSG----------RSPRARKPKKPATSSSAAGGGGGG 456
            .....|.....|:.:..||...|:......|          ..|.||||                
Zfish    85 HPHFFGTQHREPLNFYPWVLRNRFFGHRFQGNDVSQDTLLLHGPFARKP---------------- 133

  Fly   457 VEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQN 521
                           ||.|||||.:||.||:..|.:|.|:....|:||:..|.|:|.|:|:||||
Zfish   134 ---------------KRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANSLSLSETQVKVWFQN 183

  Fly   522 KRAKLKK 528
            :|.|.|:
Zfish   184 RRTKYKR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 28/55 (51%)
Engrail_1_C_sig 529..554 CDD:431338 57/202 (28%)
emx1NP_937787.1 Homeodomain 134..190 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231
Blue background indicates that the domain is not in the aligned region.

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