Protein Alignment inv and hoxd13a

DIOPT Version :10

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_571244.2
• Gene: hoxd13a / 30407
• ZFINID: ZDB-GENE-990415-119
• Length: 256
• Species: Danio rerio
• Alignment Length: 291
• Identity: 59/291 - (20%)
• Similarity: 96/291 - (32%)
• Gaps: 111/291 - (38%)

  Fly   304 GGG------SVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANIC 362
            |||      :|..|:.|       |:.:|....||..|......:..|.:.:...||.|::.
Zfish     3 GGGLDEEFINVYPSAFG-------THSSRCTSGAPVLSAVDRPTSVCNESISPYFSFPSNIG--- 57

  Fly   363 SNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGE------DSGTPIVW----- 416
                 |.|........|:...|.:.|..|         |.:.::|:      |.|....|
Zfish    58 -----SGSFTFGCHLENSYKVPQNAVFPP---------GVAKQNGQFANKPVDHGEASSWLKEFA 108

  Fly   417 ------------PAWV-------------------------------------YCTRYSDRPSSG 432
                        ||::                                     ||  :.|:.
Zfish   109 FYQGCARSYPRIPAFIDLPVVQRAMMGDLRHETCLTMEGHQHWDWSNNCSSQLYC--FQDQT--- 168

  Fly   433 RSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLT 497
            |||...||....                |||........::.|..::..||..|:.|:|..:::|
Zfish   169 RSPHIWKPSLTE----------------EAAAASFCQRGRKKRVPYTKFQLKELEREYNTTKFIT 217

  Fly   498 EKRRQQLSGELGLNEAQIKIWFQNKRAKLKK 528
            ::.|::::....|:|.|:.|||||:|.|.||
Zfish   218 KENRRRIASSTNLSERQVTIWFQNRRVKDKK 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	18/55 (33%)
		Engrail_1_C_sig	529..554	CDD:431338	59/291 (20%)
hoxd13a	NP_571244.2	Homeodomain	192..248	CDD:459649	18/55 (33%)