DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and hoxb5a

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_571176.2 Gene:hoxb5a / 30317 ZFINID:ZDB-GENE-980526-70 Length:275 Species:Danio rerio


Alignment Length:257 Identity:68/257 - (26%)
Similarity:110/257 - (42%) Gaps:56/257 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 GALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANI 361
            |:...|..|..:|.:.:.|:.:.|....|....::|        ..::.....||.|.:|.....
Zfish    44 GSYGYNYNGMDLSVNRSTSTGHFGAVGDNSRVFQSP--------APETRFRQPSSCSLASPEPLP 100

  Fly   362 CSN------------SNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPI 414
            |||            |:.|.:||.::..:||....:|            ...||.::.|.|    
Zfish   101 CSNSESLGPKGSSPPSDQSTTTAGNNLNSNTHFTEID------------EASASSETEEAS---- 149

  Fly   415 VWPAWVYCTRYSDRPSSGRSPRA-RKPKKPATSSSAAGGGGGG------VEKGEAADGGGVPEDK 472
                         ..::..:||. :|.:..|||:::|...|..      :.|...:.....|:.|
Zfish   150 -------------HRANNSAPRTQQKQETTATSTTSATSDGQAPQIFPWMRKLHISHDMTGPDGK 201

  Fly   473 RPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKN 534
            |.|||::..|...|:.||:.|||||.:||.:::..|.|:|.||||||||:|.|.||.:..|:
Zfish   202 RARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 29/55 (53%)
Engrail_1_C_sig 529..554 CDD:431338 1/6 (17%)
hoxb5aNP_571176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..181 28/147 (19%)
Antp-type hexapeptide 182..187 0/4 (0%)
Homeodomain 201..257 CDD:459649 29/55 (53%)

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