DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and ceh-12

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_491693.1 Gene:ceh-12 / 172255 WormBaseID:WBGene00000436 Length:180 Species:Caenorhabditis elegans


Alignment Length:262 Identity:63/262 - (24%)
Similarity:87/262 - (33%) Gaps:112/262 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 SIDNILKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRS-PLKAPKKSGKPLNLAQ 343
            |||::||.                        ||.|.........:.| |.:.|..|........
 Worm     5 SIDSLLKI------------------------STSSQNEDQKLESHPSPPSQIPNYSTSCSEELM 45

  Fly   344 SNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGE 408
            ..||..:..:..:||.|..|:|....||.|..|...:...||                       
 Worm    46 KMAAKAAQFAAQASLENSFSSSTSPTSTVTPLSAYTSLVQPV----------------------- 87

  Fly   409 DSGTPIV------------WPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGE 461
               .|::            |.||            |:.                           
 Worm    88 ---LPLIYDHLALTYSVNAWQAW------------GKM--------------------------- 110

  Fly   462 AADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKL 526
                      :|||||||..||.:|:.:|::||||:..||.||:.:|.|:|.||||||||:|.|.
 Worm   111 ----------RRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKN 165

  Fly   527 KK 528
            |:
 Worm   166 KR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 32/55 (58%)
Engrail_1_C_sig 529..554 CDD:431338 63/262 (24%)
ceh-12NP_491693.1 Homeodomain 111..167 CDD:459649 32/55 (58%)

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